Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq460139 167 2e-36 seq297675 116 3e-21 seq985049 89.7 4e-13 >seq460139 Length=318 Score = 167 bits (184), Expect = 2e-36 Identities = 193/260 (74%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 34225 GTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAACCGCATGCTTTGCAGCCCTGA 34284 ||||| ||||| || ||| | ||||| |||||| | ||||| || ||||| ||| Sbjct 1 GTGTTCAGCTTGTGGTTGAACTCTAGCGGGCCGTGGAAGCCGCAAGCCTTGCACGTCTGG 60 Query 34285 CAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGA 34344 | ||| | ||| || ||||| | | | | |||||||||||||| || | ||| Sbjct 61 CTGATGGTCCCCTTCTTCTGCGACACCAGCAACACGGTCTCCGGGTTGTCGCAGCCGGGA 120 Query 34345 CACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGG 34404 ||||||||||||||||| ||||| || || | ||||||||| | ||| |||| ||||| Sbjct 121 CACAACACAAACTTGCGTATGAAGCCGTCCAACAGGTCCTGCAGCTTCACGGCCTCGTGC 180 Query 34405 GAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCG 34464 |||||||| |||||||| || ||||| ||| | || | ||| || || ||||| ||||| Sbjct 181 GAGCCGTTCACGATGAAGCGATCGTTCTTGAAGTCAAACTGGGTCTGGGCGCCGAGCTCA 240 Query 34465 CACCCGAAGTACTTTGTCGG 34484 || || ||||| || || || Sbjct 241 CAGCCAAAGTATTTAGTGGG 260 >seq297675 Length=264 Score = 116 bits (128), Expect = 3e-21 Identities = 115/147 (78%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 34507 GCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCG 34566 ||||| || | ||| ||||||||| || ||||||||||||||||| ||||| || ||| Sbjct 99 GCCTTTGCAACTTCTATCATGTTGACAATAACAGTCTTGATGCCGTTTCCCTTGCCCTCG 158 Query 34567 ACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG--CGGT 34624 |||||||| |||| || ||||| ||||| ||||||||||| || | || | || | Sbjct 159 ACCTTGGCTAAGATCCGGGGCATCTTGTAACGGTAGAACGCATC--GCTGATGGAACGAT 216 Query 34625 TAACGTTCACAGTCCCCATCGTGGCTG 34651 | |||||||| |||||||| || ||| Sbjct 217 TCACGTTCACGCTCCCCATCTTGACTG 243 >seq985049 Length=630 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 110268 TTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC 110327 |||||||||| || || || ||||| | || || |||||||||||| | ||| || Sbjct 577 TTAAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAG 518 Query 110328 CTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGG 110387 || ||||||| ||| | || || |||||| |||||||| ||| | || | Sbjct 517 CTTCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAG 458 Query 110388 ATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATT 110447 | ||||| | | || | || ||||| ||| |||| |||| | | || || | || | Sbjct 457 ACCAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACT 398 Query 110448 ACAACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||| ||||| ||||| || | ||| |||| Sbjct 397 ACAACATCCAAAAGGAATCAACACTCCACTTGGT 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406711850872589