Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1197828 125 1e-22 seq1211838 104 4e-16 seq255620 86.0 1e-10 >seq1197828 Length=1358 Score = 125 bits (138), Expect = 1e-22 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCG-TGGGACAAGGCCTTTTGCGAGGTCGACCAACC 2035624 || || || ||||||||||| || | |||||| | ||| | |||||||||| Sbjct 949 GAGAAACGAACCGACGACATCA-GCAGCTGGGACGCAGACTTCCTCAAGGTCGACCAGGG 891 Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 || || ||||| |||||||||||||||||||||||||||||||| || || || | Sbjct 890 AACGCTGTTTGAACTGATCCTCGCCGCCAACTACCTCGACATCAAGGGGCTGCTAGACGT 831 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 |||||||||||| |||||| | ||||| || ||| | || || || ||| | || || Sbjct 830 CACGTGCAAGACCGTCGCCAACATGATCAAAGGAAAGACCCCGGAAGAGATCAGAAAAAC 771 Query 2035745 CTTTAACATCAAG 2035757 ||| ||||||||| Sbjct 770 CTTCAACATCAAG 758 >seq1211838 Length=1880 Score = 104 bits (114), Expect = 4e-16 Identities = 188/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||||| ||||| | || || || |||| |||| || | | || ||||| Sbjct 330 AAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTCTCGTTG 271 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| ||||| ||||| || ||||| | |||||| ||| || || | ||| | Sbjct 270 ACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTCTCTCCA 211 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAA 796320 || |||| | ||||||| || |||| | ||||||||||| || || ||||| Sbjct 210 TCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCTGTCCAG 151 Query 796321 AAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGA 796380 || ||||| || ||||| ||||||||| ||| || ||||| |||| ||||| | Sbjct 150 AATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGGAAGATC 91 Query 796381 ACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || ||||| ||| || ||||| || || || || Sbjct 90 ACGAAGCGGCGGGGATTTTCGCGGAGGAGAGGTTC 56 >seq255620 Length=253 Score = 86.0 bits (94), Expect = 1e-10 Identities = 138/192 (72%), Gaps = 10/192 (5%) Strand=Plus/Plus Query 2411449 GGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA-AA 2411507 ||||| | ||||| || |||||| |||||||||| ||| || | | | || | || Sbjct 57 GGGTTCATGAGGTGTATTCGCTTGGCGTAGCCCAGCTGCGGTAGATACTT-CTCGGAGAA 115 Query 2411508 GGCAAAGATCTTGCGCTGGTCG-CGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCT 2411566 || |||||||| | ||||||| ||||| |||||||| ||||| || | ||| | || || Sbjct 116 GGTGAAGATCTTTCTCTGGTCGACGCCC-CCAAACTGTGCGTCCACCTTGAGATACTCCT 174 Query 2411567 CGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCAT-- 2411624 |||| || ||||| | | || |||| ||| ||| ||| | |||| |||| | Sbjct 175 CGTCCAGAGCCTGGAGGCCGGGATAGAGGAGACCGCTCAGCAGGGGGT---GGTCTACTT 231 Query 2411625 -CTTGACCACCT 2411635 ||||||||||| Sbjct 232 GCTTGACCACCT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7786653144446847