Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq878664 96.9 3e-15 >seq878664 Length=291 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 43754 GTTGCCGAGCCGCCGCGTGAAGGAGGCCTTGTAGAGGCACTCGACGCAGACCGACGACAG 43813 |||||||| |||| |||| | || || | | || |||| | ||||| | | || Sbjct 247 GTTGCCGATCCGCTTCGTGTATGAAGCGTCGCTGAAGCACGACATACAGACGGCGGTGAG 188 Query 43814 CTTCACGAAGCTCTCCGCCAGCGGGAGGAGCTGGTACACG--GAC-CCGAACAGGGTCCG 43870 |||||||| |||||| |||| ||||| ||| || || | | | || ||| || || Sbjct 187 CTTCACGACGCTCTCGGCCAACGGGACGAG---GTTCAGGATGTCTCCAAACCCGGCTCG 131 Query 43871 CTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGTCCTC 43930 |||||| || ||||| | ||||||||||| |||||||| |||| ||| ||||| ||||| Sbjct 130 CTGGAACGTTCCGTCCAACGCGGCCACGATCACGATCTTGCCCGAGTTGGCCATCTCCTC 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468792242148040