Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq985049 93.3 3e-14 seq1030155 89.7 3e-13 >seq985049 Length=630 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823 |||||||| ||| | || || | ||||| || ||||| ||||| || | | | || ||| Sbjct 360 CAGGACCAAGTGGAGTGTTGAT-TCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCAT 418 Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 | |||| ||||| || |||||||||| || || |||||| | || | ||||| |||| Sbjct 419 CTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTGT 478 Query 34884 CGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 | | || || ||||| || || || | || || || || || | ||| || Sbjct 479 CTTGGATCTTCGCCTTGAC--ATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAAT 536 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| || || || |||||||| Sbjct 537 GGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCAT 572 >seq1030155 Length=683 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || |||| ||||| ||| ||||||||||||||| || || || || | || | Sbjct 489 CTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGACCG 548 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||| || |||||||||||||| | || |||||| | || | || |||||| Sbjct 549 TCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCTTCCTTG 608 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTA 34940 || | || || ||| || || || || | || |||||| || |||| || | Sbjct 609 TCTTGAATCTTGGCTTTCAC--ATTCTCAATGGTGTCCGAGGCCTCAACTTCAAGAGTGA 666 Query 34941 TGGTCTTTCC 34950 |||||||||| Sbjct 667 TGGTCTTTCC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320857010300987