Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq985049 123 2e-23 seq1030155 89.7 4e-13 >seq985049 Length=630 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||| || || || ||||| ||||| ||||| || || | | ||| || Sbjct 357 ACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCC 416 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || ||||| | ||||| | || || || || || || |||||||| Sbjct 417 ATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTT 476 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| | || | ||| || ||| ||||||||| || || || Sbjct 477 GTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAAT 536 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791 ||||| || || | |||||| || || ||||||||||||| Sbjct 537 GGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTAA 577 >seq1030155 Length=683 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || || || || |||||||| ||||| | | || ||| || Sbjct 492 AGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGACCGTCT 551 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||||||||| || | |||| || || || || || ||||| || || |||||| Sbjct 552 TCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCT 611 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| ||| | || | ||||| || || ||||||||||| || || Sbjct 612 TG-AATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAACTTCAAGAGTGATGGT 670 Query 29754 TTTGCC 29759 || || Sbjct 671 CTTTCC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379499580041493