Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1030155 156 8e-33 seq1216124 87.8 3e-12 >seq1030155 Length=683 Score = 156 bits (172), Expect = 8e-33 Identities = 146/186 (78%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| ||||| || ||||| || ||||| || || ||||| || ||| ||| ||||||| Sbjct 492 AGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGACCGTCT 551 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || |||||||| || || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct 552 TCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCT 611 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| ||||| ||||| ||||| || || | || ||||| | ||| || ||| Sbjct 612 TGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAACTTCAAGAGTGATGGTC 671 Query 82779 TTGCCT 82784 || ||| Sbjct 672 TTTCCT 677 >seq1216124 Length=2826 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 198307 AACAACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGA 198366 |||| |||||| | || |||| || ||| | | |||||| | | || || ||| || Sbjct 2048 AACAGCTCGAAGAATCGAAAACGCACGACGATTTGTGGAATTCGGCCCAGATTCAGTTGG 1989 Query 198367 TAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAAT 198426 | | |||||||| |||||| | || || | |||||||||||||| ||||| | || | Sbjct 1988 TCAAGGAAGGAAAGATGCATGGCTTCTTGCGTATGTACTGGGCTAAGAAGATCTTAGAGT 1929 Query 198427 GGACAAGAACACCGGAAGACGCTTTG 198452 |||| ||| |||||||| |||||| Sbjct 1928 GGACTCGAAGCCCGGAAGAAGCTTTG 1903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 966501738654547