Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1002630 138 1e-27 seq985049 86.0 6e-12 >seq1002630 Length=654 Score = 138 bits (152), Expect = 1e-27 Identities = 387/588 (66%), Gaps = 7/588 (1%) Strand=Plus/Plus Query 148315 ACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACG 148374 ||||||| || || ||||| ||||| | ||||| ||||| | |||||||||||| | Sbjct 28 ACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGAAGCCGTGGGCATGGGAG 87 Query 148375 CTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGT 148434 | | || || || || || | ||| | | | || || ||| || || ||||| | Sbjct 88 CGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGCCTTGAGTGCTGCCCAAT 147 Query 148435 CCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGG 148494 ||||||| | || || |||||||||||||||||||| ||||| || ||| | | Sbjct 148 CCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTACTGTAGAATCCCCTTGCTGACCG 207 Query 148495 GGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554 | | || ||||||| ||| || || | | | || |||||||||||||| || | Sbjct 208 GACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCGGCGAGTTCGCAGCTCGCTTCCA 267 Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTT 148614 |||||||| || || || || || || |||||| | || ||||| | Sbjct 268 AAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTGAGTTTCTGAGCTTCTTCGCTCT 327 Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674 || |||| ||||| | | | || || || || ||||| | ||| | || |||| Sbjct 328 CGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGACCCTGGATGCCGATACCGATGG 387 Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGTCGATG 148733 | || || ||||| ||| ||| ||| | | ||| ||| |||| ||||||| Sbjct 388 GTCGATGACGCATGTTCGAGGTCTTCGC-CTCGGGAATCGGGTAGAAGTTGACGTCGATG 446 Query 148734 ATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC-GCAGCAATTCAAAATCGTA 148792 || || | ||| || | || ||| || | || | ||| || |||||| | Sbjct 447 ATTTTATTAAGGTTTTTCGTGACGGTCTTCGTGA-CCTCCTTGAGCTTCTCGAAATCGAA 505 Query 148793 ---CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGT 148849 ||||| | |||| | ||| |||||||| ||||| || ||||| |||||| Sbjct 506 CGTCTTGTTCGGTTTGATGTACATGTTGACGGCGATCGAGGCGAGGTTGCAAACGGCCAC 565 Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCA 148897 ||| ||||| | || |||| || ||||| | ||| || |||||||| Sbjct 566 CTCTTCCGGCGAAGTGAACTCGACAATCTCCGTGCAGAGGTTGCTGCA 613 >seq985049 Length=630 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || | |||||| || ||| | || | ||||| ||||| || |||||||| || ||| Sbjct 418 TCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTG 477 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||| | || |||| | || || || | ||| | | Sbjct 478 TCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAATG 537 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||| |||||||||||||| Sbjct 538 GTTTTACCCGTGAGGGTTTTCACGAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476059068646520