Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq579959 87.8 5e-13 >seq579959 Length=226 Score = 87.8 bits (96), Expect = 5e-13 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 17736 CATCAGTCGTCCGCGCATCATCCATAGATTGCTCAGGGCAAACAACGTATGTAACTGCTG 17795 |||||| | | |||| |||||||| ||||||||| ||||||| ||| |||||| Sbjct 194 CATCAGCTGCCTGCGCGCCATCCATAAATTGCTCAGCGCAAACAGCGTCATCAACTGCGC 135 Query 17796 CGTGTTCTTCACCAAGCCTCGATAGCGCACCTTCAAATGCCCGAACTGGCGCTTGATGAC 17855 |||||||| |||| || ||||||||||| || ||||||| |||||||| Sbjct 134 GGTGTTCTTGGCCAATCCCTTGTAGCGCACCTTGGTGAAGCCAAACTGGCATTTGATGAC 75 Query 17856 CCGGAACGGATGTTCTAC 17873 ||| |||||||| || || Sbjct 74 CCGAAACGGATGCTCCAC 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126034691637464