Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1002630 109 5e-19 seq985049 109 5e-19 >seq1002630 Length=654 Score = 109 bits (120), Expect = 5e-19 Identities = 391/600 (65%), Gaps = 15/600 (3%) Strand=Plus/Plus Query 146943 AGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCAT 147002 |||| | || || || || || |||||||| | || || || |||| || || ||||| Sbjct 23 AGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGAAGCCGTGGGCAT 82 Query 147003 GTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG 147062 | || | | | ||||| || | |||| | ||| || |||| | | | Sbjct 83 GGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGCCTTGAGTGCTGC 142 Query 147063 CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCA-CTCCTCGAC 147121 ||| ||||| | | ||| || |||||||||||||||||||| || | | ||| | | Sbjct 143 CCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTACTGTAGAATCCCCTTG-C 201 Query 147122 TGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTG 147181 || | |||| || || |||||| ||| || || || || | ||| ||||| | Sbjct 202 TGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCGGCGAGTTCGCAGCTCG 261 Query 147182 CCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTT 147241 | || | || || || || || ||||| ||| || ||| || ||||||| Sbjct 262 CTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTGAGTTTCTGAGCTTCTT 321 Query 147242 CGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGC 147301 |||||||| | || ||||| || | ||| ||| || | ||||||||| |||| | Sbjct 322 CGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGACCCTGGATGCCGATAC 381 Query 147302 CGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGA 147360 |||| |||||||| ||| | |||||| ||| | || || ||| |||| Sbjct 382 CGATGGGTCGATGACGCATGTTCGAGGTCTTCGC-CTCGGGAATCGGGTAGAAGTTGACG 440 Query 147361 TCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAA 147420 || || || || || ||||| | || || || | ||||| ||||||||| Sbjct 441 TCGATGATTTTATTAAGGTTTTTCGTGACGGTCTTCGTGACCTCCTTGAGCTTCTCGAAA 500 Query 147421 TCATAAGTCCCGTCTTCG---ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTG 147477 || | || | | |||| | ||| ||| ||| |||||||| || || || ||| Sbjct 501 TCGAACGT--CTTGTTCGGTTTGATGTA--CAT--GTTGACGGCGATCGAGGCGAGGTTG 554 Query 147478 CAGACGGCCGTCTCTT-CGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCA 147536 || |||||| ||||| ||||| | || ||| || || || | ||| ||||||||||| Sbjct 555 CAAACGGCCACCTCTTCCGGCGAAG-TGAACTCGACAATCTCCGTGCAGAGGTTGCTGCA 613 >seq985049 Length=630 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | |||| || ||||| |||||||||||| || |||||| | Sbjct 358 CGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCA 417 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| ||||| | |||| | ||||||||| ||||| || ||||| ||||| Sbjct 418 TCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTG 477 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | |||||||| | || ||||| | || | Sbjct 478 TCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAATG 537 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || ||||| | |||||||||||| Sbjct 538 GTTTTACCCGTGAGGGTTTTCACGAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469353168044280