Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1211838 109 8e-18 seq277695 93.3 6e-13 seq1170154 89.7 7e-12 >seq1211838 Length=1880 Score = 109 bits (120), Expect = 8e-18 Identities = 237/352 (67%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || || || || ||||| || || |||||| || | ||||| |||| ||||| Sbjct 56 GAACCTCTCCTCCGCGAAAATCCCCGCCGCTTCGTGATCTTCCCTATCCAGTACCATGAC 115 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| |||||| || ||||| || ||||| || ||||| || || ||||||||||| Sbjct 116 ATCTGGCTGATGTAC-AAGAAGGCAGAAGCCTCATTCTGGACAGCAGAAGAGGTCGACCT 174 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | |||| || ||||||| | | || | || | ||| | ||||||||| ||| Sbjct 175 ATCCAAGGACATGGCTCACTGGGAGGCCCTCAAAGATGGAGAGAGGCATTTCATCTCGCA 234 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 ||| | ||||| ||| ||||| || || ||||| |||||| || | | || | Sbjct 235 CGTGTTGGCCTTCTTT-GCCGCATCGGACGGAATCGTCAACGAGAATCTCGTGGAACGGT 293 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | | || || || | | ||||| || | || ||||| |||||||| || || | Sbjct 294 TCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTACGGTTTCCAGATTGCTATGG 353 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || | || || || | ||| || |||| || || ||| ||||||| Sbjct 354 AGAATGTGCATTCCGAGATGTACAGTCTGTTGATAGATACGTACATCAAGGA 405 >seq277695 Length=258 Score = 93.3 bits (102), Expect = 6e-13 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATAT 263231 ||||||||||||||||| |||||||||||||||| | || | | | ||| | || Sbjct 52 CGATCTCAAGGCTCTCTACAAGACCGTGTGGGAGATCTCCCAGAAGACCATCATCAAGAT 111 Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291 ||| |||||| | | | | ||||||||||||| ||||||||| | || ||||| | Sbjct 112 GGCCGCCGACAGGGGAGCGTTCATCGACCAGAGCCAATCGCTCAACATCCACATCGCCAA 171 Query 263292 CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGC-GTCGCGGCCTCAAGA 263350 || | || || | || ||||||||| | ||||||| ||| ||| | |||| Sbjct 172 ACCAAACTACGGGAAACTGACTTCGATGCACTTTTTCGCGTGGCAGTC-CGGATTGAAGA 230 Query 263351 CTGGCATGTACTATCTGCGCACC 263373 | || ||||| || || || ||| Sbjct 231 CGGGGATGTATTACCTCCGTACC 253 >seq1170154 Length=949 Score = 89.7 bits (98), Expect = 7e-12 Identities = 137/190 (72%), Gaps = 8/190 (4%) Strand=Plus/Plus Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATC-AACAAG-GAGGGCCTCGACACTTTGCCGAGCG 1456183 |||||||||||||| | |||||||| || | ||| || || ||||| |||| | Sbjct 2 AAGGCCGACTGGGCTCTTCAGTGGATCTGTCACGAGAGTGCATC----CTTTGGCGAGAG 57 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTT 1456242 || | | ||||| || |||||||| ||||| ||||| || ||||| |||||| || Sbjct 58 AATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGTTTTGCCGCCATTTT 117 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTC 1456302 ||| | ||||| || || |||||||| || | || || |||||||| || ||| || Sbjct 118 CTGGTTGAAGAAACGTGGACTCATGCCTGG-CCTCACATTCAGCAACGAGTTGATCTCTC 176 Query 1456303 GCGACGAAGT 1456312 | || || || Sbjct 177 GAGATGAGGT 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7060306529964226