Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq985049 129 6e-25 seq1002630 107 2e-18 seq261774 86.0 6e-12 seq1055522 82.4 8e-11 >seq985049 Length=630 Score = 129 bits (142), Expect = 6e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || | ||| || || ||||||||||| |||||||||||| | ||| | Sbjct 355 AGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGG 414 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || || ||||||||||| || || || || ||||| ||| Sbjct 415 CCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCT 474 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||||| || | || ||||| | ||| || || || ||| Sbjct 475 TTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTA 534 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||||||||| || | ||||| |||||||| |||||||| Sbjct 535 ATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTT 575 >seq1002630 Length=654 Score = 107 bits (118), Expect = 2e-18 Identities = 267/400 (67%), Gaps = 8/400 (2%) Strand=Plus/Minus Query 8542 TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCC 8601 ||||||||||| || ||||| | || | ||| | || ||||| || || || | Sbjct 406 TCGAACATGCGTCATCGACCCATCGGTATCGGCATCCAGGGTCTCGCGGATCTCTTCATC 347 Query 8602 ATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAA 8661 || |||| || | ||| ||| ||||||| | | |||||| | | || ||| Sbjct 346 CTGATGCGTTATCCGTTCGAGAGCGAAGAAGCTCAGAAACTCAACGTCCAGATCTTTGAA 287 Query 8662 ACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTG-GGCACGTA 8720 || | ||||||||||| || ||||| ||||| |||| ||| ||||| ||| | || Sbjct 286 ACAATCTATTACGGCGCTTTGGAAGCGAGCTGCGAACTCGCC-GAGAAAGAAGGCCCATA 228 Query 8721 CGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGT 8780 | |||||| || | || | |||| || || | || |||||||||||||| || Sbjct 227 CTCTACGTACGAAGGATGTCCGGTCAGCAAGGGGATTCTACAGTACGACATGTGGAACGT 168 Query 8781 CACGCCCACCTCTTTGTGGAATTGG--AGCGATTTGAAACGC-AAAATTGCTCAATTCGG 8837 || |||||| | | ||| ||||| ||| | || || || || || || ||| Sbjct 167 AACCCCCACCAATCTCTGGGATTGGGCAGCACT---CAAGGCTAAGATCGCACAGCACGG 111 Query 8838 TTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGG 8897 | || ||||| || | | ||| ||||||||| || | || ||||| || | || Sbjct 110 CGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTCAGATCCTCGG 51 Query 8898 AAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 || ||||||||||| || |||| ||| |||| | ||| Sbjct 50 CAATAACGAATCCTTCGAACCGTACACTTCCAACATCTAC 11 >seq261774 Length=254 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| ||||||| || ||||||||| | ||| ||||||||||||||||||||||| Sbjct 119 CGCCATCATCGAATCCCAGGTCGAAACCGGAACGCCATACATGCTGTACAAAGACGCTTG 60 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGC 8346 |||| | || || || || | ||||| ||| |||||||||| || ||| Sbjct 59 CAACTCAAAGTCGAACCAGCAGAATCTCGGCACGATTCGTTGCAGCAACCTCTGC 5 >seq1055522 Length=411 Score = 82.4 bits (90), Expect = 8e-11 Identities = 112/156 (72%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 7828 CGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 || ||||| |||||| ||||| ||||||||| | | ||| |||| ||| || ||| Sbjct 332 CGTGCCAAGGGTAGCTACATCGCCGGCACCAACGGCATATCCAACGGTATAGTTCCTATG 273 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGC 7944 |||||||| | ||| ||| | | || | || ||||| || || |||||| ||| Sbjct 272 TTGCGCGTCTACAACAACACAGCACGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGC 213 Query 7945 GCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 || || |||||| |||| || |||||||||||| Sbjct 212 GCGTTCGCAATCTATCTGGAACCCTGGCACGCGGAC 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497701984687960