Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1197690 165 1e-35 seq1002630 114 2e-20 seq1055522 93.3 6e-14 >seq1197690 Length=1171 Score = 165 bits (182), Expect = 1e-35 Identities = 484/737 (66%), Gaps = 14/737 (2%) Strand=Plus/Plus Query 69891 TTTAGAGATTAGAGCACA---ACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947 ||| |||| |||||||| |||| | || || || || || |||||||| || || Sbjct 264 TTTGGAGACCAGAGCACACTGACGT---AGAGTATCGTAAATCCCTTCTATGCTGTCGTC 320 Query 69948 TATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAA 70007 | |||| | || || |||||||| | ||| | | ||| | ||| | || | Sbjct 321 TGACATGGCCAATAGGAAGCAGCTAGATAACTGAGGTCTTGGAGTAGCAGCACTGAAGAG 380 Query 70008 TGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGA 70067 || || || || |||||||| || || || | |||| ||| || |||||||| || Sbjct 381 GGTCGGGGAAGCATGAGTGAAGTATCGCTCCGACAAAAGATCGTAGGTCTCAATAGCGGA 440 Query 70068 TTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTT 70126 || || || | | | || || |||| ||||||||||||| ||| ||||| || |||| Sbjct 441 ATCAATGTCTTCTCCG-TGGATGCCTACAGCGACACGCATCAGCATGTGCTGCGGACGTT 499 Query 70127 CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAAT 70186 | || ||| | || || | || ||| || ||||| |||||||| ||||| | Sbjct 500 CGACGACTTTCTGATCAATGCGAAGCAAGTACGAACGCTCCAGCGTTTTAAATCCAAAGT 559 Query 70187 AGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 | ||||| ||||| |||| ||||| || ||| | ||||| ||| ||| || || Sbjct 560 AATTGTAGCTGAAA--TCTCGATCGTAGATTATAGCGGAATTAAGTCGATCAGCATTCTT 617 Query 70245 GGTAACTATATCCATAACAGTAGGTGAGATAATCGGAG-ATCGTTTACCATTTTTAGGAT 70303 | || || | | | | |||||| || || | | | | | ||| | | | Sbjct 618 TGAAATTACTTGCTGGTGAAAATCTGAGATCATTGGGGTAGCCCTCTTCGTTTCTTTGTT 677 Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363 |||| || ||||||||||| |||||||| || ||| ||||| |||||||| | Sbjct 678 ATACATC-TTATGCAAATCTTCCATAACATCACTGAAAGATTTCTTTGTCTCCTTGTGCA 736 Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAG 70423 | ||||| | || || | || || || |||||||| ||||| |||| || || | Sbjct 737 AGTTTGAGACTGCAATACGTGCAGCAAGGATAGCATAATCAGGGTGTTTAGTGGTCATTG 796 Query 70424 TAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCC 70483 | || || |||| || || || |||| | || | ||||||||| || ||| || | Sbjct 797 TGGCGGCCGTTTCGGCTGCCAAATTATCAAGCTCGACAGTTGTAACGCCAGGATAGAGAC 856 Query 70484 CTTGAATAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAAC 70543 | | || || ||||| | |||| || || | || || |||| |||||||| | Sbjct 857 CGTTGATTACCTTCATCGTTATTGCAGCCGGTTCCAGAAAATCCATGTTGAGACCATAGC 916 Query 70544 ATAATTTTCTAATACGAGATGTAATTTTATCAAACATAACATTCTCCTTATTTCCACTTC 70603 | | |||| ||| ||||| || || || || || || | || ||| |||| | Sbjct 917 AAAGTTTTTGAATTCGAGAGGTTATCTTGTCGAAATGGACCTCTTCTTTACGTCCATCGC 976 Query 70604 GTTTAATGACGTACATT 70620 |||| ||||||||| Sbjct 977 GTTTCTGCACGTACATT 993 >seq1002630 Length=654 Score = 114 bits (126), Expect = 2e-20 Identities = 299/456 (66%), Gaps = 0/456 (0%) Strand=Plus/Plus Query 68743 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCA 68802 || ||||| || || || || ||||| | ||||| ||||| || || || ||||| Sbjct 6 CGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCG 65 Query 68803 GTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATT 68862 || || || || ||||| || || | | | ||| | || || || | ||| Sbjct 66 GTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATC 125 Query 68863 TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTAT 68922 ||| | || || | ||||||||| |||| | || || ||||| | ||||| Sbjct 126 TTAGCCTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTAC 185 Query 68923 TGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCA 68982 |||||||| || || || | |||| | || || || || ||||| | || Sbjct 186 TGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCG 245 Query 68983 GCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTG 69042 || ||||| || || || || || || |||||||| |||||||| || |||| ||| Sbjct 246 GCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTG 305 Query 69043 AGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAAT 69102 || | || |||||| || ||||| |||||| | | || || || ||| || | Sbjct 306 AGTTTCTGAGCTTCTTCGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGA 365 Query 69103 CCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATA 69162 ||||| | || |||||||| |||| ||| | | | || || | | || || ||||| Sbjct 366 CCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTTCGCCTCGGGAATC 425 Query 69163 GGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || || | || | || || ||||||||||| ||| Sbjct 426 GGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTT 461 >seq1055522 Length=411 Score = 93.3 bits (102), Expect = 6e-14 Identities = 177/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATT 69653 || || | ||| || || ||||||||||| || || || || || || |||| || | Sbjct 73 ACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAG-TCCCTGGCTCGAAC 131 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 ||| || || || || ||||| || |||||||| || || | | || | ||||| || Sbjct 132 TTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGG 191 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 ||| ||||| || || | | || || || || || || || || || | ||| | || Sbjct 192 TTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGC 251 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||||| || ||||| | || ||| |||| ||||| || ||| | || || || || | Sbjct 252 TGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGC 311 Query 69834 AATATAACTTCCTCTTG 69850 || || || || |||| Sbjct 312 GATGTAGCTACC-CTTG 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676448269443720