Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1211838 149 5e-31
seq943454 122 7e-23
seq521853 122 7e-23
seq498209 82.4 6e-11
>seq1211838
Length=1880
Score = 149 bits (164), Expect = 5e-31
Identities = 220/312 (71%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768
|| || || || || |||||||| |||| |||||||| || ||| | || ||||| |||
Sbjct 95 TTCCCTATCCAGTACCATGACATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGG 154
Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA 43828
||||||||||| || || | | || ||| | || || ||| || | ||| |
Sbjct 155 ACAGCAGAAGAGGTCGACCTATCCAAGGACATGGCTCACTGGGAGGCCCTCAAAGATGGA 214
Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888
|| | ||||| || || || ||||| || ||||| || ||||| || |||||
Sbjct 215 GAGAGGCATTTCATCTCGCACGTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTCAAC 274
Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948
|| ||| | || ||||| || ||||| || || | || || || ||||| ||
Sbjct 275 GAGAATCTCGTGGAACGGTTCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTAC 334
Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008
|| || || ||||| || || ||| | ||||| || ||||||||||| |||||||||||
Sbjct 335 GGTTTCCAGATTGCTATGGAGAATGTGCATTCCGAGATGTACAGTCTGTTGATAGATACG 394
Query 44009 TACATCAAAGAT 44020
|||||||| |||
Sbjct 395 TACATCAAGGAT 406
>seq943454
Length=587
Score = 122 bits (134), Expect = 7e-23
Identities = 135/180 (75%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194
||||||| |||| || || || ||||| || |||||| |||| ||||||| ||||||||
Sbjct 1 CATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGC 60
Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254
| || || || ||||||| || ||| ||||||||||||| ||| | || | ||
Sbjct 61 CAAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTA 120
Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314
| ||||||||||||||||| | ||||||||| |||| || | ||||| |||||
Sbjct 121 TGTCAATCACATAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGGCCATTCCCAAC 180
>seq521853
Length=341
Score = 122 bits (134), Expect = 7e-23
Identities = 135/180 (75%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194
||||||| |||| || || || ||||| || |||||| |||| ||||||| ||||||||
Sbjct 1 CATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGC 60
Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254
| | || || || ||||||| || ||| ||||||||||||| ||| | || | ||
Sbjct 61 AAAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTA 120
Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314
| |||||| |||||||||| | ||||||||| |||| || | ||||| |||||
Sbjct 121 TGTCAATCACGTAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGTCCATTCCCAAC 180
>seq498209
Length=238
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/232 (69%), Gaps = 12/232 (5%)
Strand=Plus/Minus
Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924
||||||||| || ||||| ||||| ||||| | ||| || ||||| || || ||
Sbjct 231 AGGTGATCTGGGACCTGTGTATGGTTTTCAATGGCGCCACTTTGGTGCGCCTTA---CAG 175
Query 40925 T---ATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATAC 40981
| ||| || | || || || | ||||||| |||||||| ||| ||||| | ||
Sbjct 174 TGAAATGAACGCAGACTACACAGGTCAAGGAATTGATCAATTGCAGGAAGTTATCAAAAC 115
Query 40982 GATTAAATCCGAT---CCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGA 41038
| ||| ||| ||||| |||||||| || |||| || ||||| || ||
Sbjct 114 TCTAAAA---GATAGGCCCGACGATCGACGTATCATCATGTGTGCCTGGAATCCTGTTGA 58
Query 41039 CGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTT 41090
| | | | |||| |||||||||||||||| ||| ||||||||||||
Sbjct 57 CATTCCTAAAATGGTTTTGCCACCTTGTCATTGTTTAGTCCAGTTTTACGTT 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391554691679365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |