Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1211838 149 5e-31 seq943454 122 7e-23 seq521853 122 7e-23 seq498209 82.4 6e-11 >seq1211838 Length=1880 Score = 149 bits (164), Expect = 5e-31 Identities = 220/312 (71%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768 || || || || || |||||||| |||| |||||||| || ||| | || ||||| ||| Sbjct 95 TTCCCTATCCAGTACCATGACATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGG 154 Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA 43828 ||||||||||| || || | | || ||| | || || ||| || | ||| | Sbjct 155 ACAGCAGAAGAGGTCGACCTATCCAAGGACATGGCTCACTGGGAGGCCCTCAAAGATGGA 214 Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888 || | ||||| || || || ||||| || ||||| || ||||| || ||||| Sbjct 215 GAGAGGCATTTCATCTCGCACGTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTCAAC 274 Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948 || ||| | || ||||| || ||||| || || | || || || ||||| || Sbjct 275 GAGAATCTCGTGGAACGGTTCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTAC 334 Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008 || || || ||||| || || ||| | ||||| || ||||||||||| ||||||||||| Sbjct 335 GGTTTCCAGATTGCTATGGAGAATGTGCATTCCGAGATGTACAGTCTGTTGATAGATACG 394 Query 44009 TACATCAAAGAT 44020 |||||||| ||| Sbjct 395 TACATCAAGGAT 406 >seq943454 Length=587 Score = 122 bits (134), Expect = 7e-23 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194 ||||||| |||| || || || ||||| || |||||| |||| ||||||| |||||||| Sbjct 1 CATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGC 60 Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | || || || ||||||| || ||| ||||||||||||| ||| | || | || Sbjct 61 CAAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTA 120 Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314 | ||||||||||||||||| | ||||||||| |||| || | ||||| ||||| Sbjct 121 TGTCAATCACATAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGGCCATTCCCAAC 180 >seq521853 Length=341 Score = 122 bits (134), Expect = 7e-23 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194 ||||||| |||| || || || ||||| || |||||| |||| ||||||| |||||||| Sbjct 1 CATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGC 60 Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | | || || || ||||||| || ||| ||||||||||||| ||| | || | || Sbjct 61 AAAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTA 120 Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314 | |||||| |||||||||| | ||||||||| |||| || | ||||| ||||| Sbjct 121 TGTCAATCACGTAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGTCCATTCCCAAC 180 >seq498209 Length=238 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/232 (69%), Gaps = 12/232 (5%) Strand=Plus/Minus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 ||||||||| || ||||| ||||| ||||| | ||| || ||||| || || || Sbjct 231 AGGTGATCTGGGACCTGTGTATGGTTTTCAATGGCGCCACTTTGGTGCGCCTTA---CAG 175 Query 40925 T---ATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATAC 40981 | ||| || | || || || | ||||||| |||||||| ||| ||||| | || Sbjct 174 TGAAATGAACGCAGACTACACAGGTCAAGGAATTGATCAATTGCAGGAAGTTATCAAAAC 115 Query 40982 GATTAAATCCGAT---CCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGA 41038 | ||| ||| ||||| |||||||| || |||| || ||||| || || Sbjct 114 TCTAAAA---GATAGGCCCGACGATCGACGTATCATCATGTGTGCCTGGAATCCTGTTGA 58 Query 41039 CGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTT 41090 | | | | |||| |||||||||||||||| ||| |||||||||||| Sbjct 57 CATTCCTAAAATGGTTTTGCCACCTTGTCATTGTTTAGTCCAGTTTTACGTT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391554691679365