Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1055522 131 1e-25 seq1002630 114 1e-20 >seq1055522 Length=411 Score = 131 bits (144), Expect = 1e-25 Identities = 231/336 (69%), Gaps = 3/336 (1%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||||| ||| |||||||| || ||| | ||||| || || |||| ||| || Sbjct 27 GGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCGCTCCATGAA 86 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 || || || | ||| | ||||| |||| || || ||| || || | ||| | Sbjct 87 CAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTCCTTGCCCGT 146 Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 |||| || | || | || || || | |||||| ||||||||||||| ||| | ||| Sbjct 147 GTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGATTGC 206 Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | ||||| |||||| |||||||| | || | ||| | |||||||||| || Sbjct 207 GAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTGTAGAC 266 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 ||||||||| || | | |||||||| | || ||||||| |||||||| || || Sbjct 267 GCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTAGCTACCCTT 326 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 ||| | ||| ||||| |||||| |||||||| || Sbjct 327 GGCACGGATGCAGTGAATGTTGAGGCCAATACCACC 362 >seq1002630 Length=654 Score = 114 bits (126), Expect = 1e-20 Identities = 197/283 (70%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851 ||| |||||| ||| ||||||| ||||||||||| ||||||| || || || || | Sbjct 11 GTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGA 70 Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911 || ||||||||| || | | || |||||||||| |||||| | ||| || Sbjct 71 AGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGC 130 Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971 ||| | | | |||||||||| ||| ||| || | || ||||||||| || | || Sbjct 131 CTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTAC---GTTCCACATGTCGTACTG 187 Query 130972 TAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTC-GACACGAG 131030 ||| || || || ||| | |||| |||| ||| ||| ||||| | || | Sbjct 188 TAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCG-G 246 Query 131031 CCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTC 131073 | || ||| ||| ||||||||||| |||||||| || ||||| Sbjct 247 CGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418625100579576