Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1002630 138 1e-27 seq1170154 89.7 6e-13 >seq1002630 Length=654 Score = 138 bits (152), Expect = 1e-27 Identities = 377/569 (66%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 || ||| ||| || || |||||||| || ||||| || || ||| | | || | Sbjct 571 GAAGAGGTGGCCGTTTGCAACCTCGCCTCGATCGCCGTCAACATGTACATCAAACC---G 515 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 | ||||| || |||| || || ||| | || || ||||| || ||||| |||||||| Sbjct 514 AACAAGACGTTCGATTTCGAGAAGCTCAAGGAGGTCACGAAGACCGTCACGAAAAACCTT 455 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATG 105211 || | | | || || || || ||||| || ||| || | || || ||| Sbjct 454 AATAAAATCATCGACGTCAACTTCTACCCGATTCCCGAG---GCGAAGACCTCGAACATG 398 Query 105212 AGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGC 105271 | || || || || ||| |||| | ||||||||||||||| | ||||| || || Sbjct 397 CGTCATCGACCCATCGGTATCGGCATCCAGGGTCTCGCGGATCTCTTCATCCTGATGCGT 338 Query 105272 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTAT 105331 | | || || ||| ||||| || || |||| | | || ||||| || || ||| Sbjct 337 TATCCGTTCGAGAGCGAAGAAGCTCAGAAACTCAACGTCCAGATCTTTGAAACAATCTAT 278 Query 105332 CACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 105391 ||| |||| | || ||||| | || | || ||| || || ||||| || | Sbjct 277 TACGGCGCTTTGGAAGCGAGCTGCGAACTCGCCGAGAAAGAAGGCCCATACTCTACGTAC 218 Query 105392 GAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGGGAAGGTGAGACCA 105449 || || | ||| | ||| ||||||| | || || | || |||| |||| || | || Sbjct 217 GAAGGATGTCCGG--TCAGCAAGGGGATTCTACAGTACGACATGT-GGAACGTAACCCCC 161 Query 105450 AGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 105508 | | || || || |||| ||| ||||||| ||| || | || ||||||| Sbjct 160 ACCAATCTCTGGGATTGGGCAGCACTCAAGGCTAAGATCGCACAGCACGGCGTTCGTAAT 101 Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 105568 |||||| | ||||| ||||| || || |||||||| || ||| | || ||||| ||| Sbjct 100 TCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTCAGATCCTCGGCAATAACGAA 41 Query 105569 TGCTTTGAACCCTACACGACGAACATCTA 105597 | ||| ||||| ||||| | |||||||| Sbjct 40 TCCTTCGAACCGTACACTTCCAACATCTA 12 >seq1170154 Length=949 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||||| ||| || || | |||||||| || ||||||||||||||||| ||| Sbjct 44 TCCTTTGGCGAGAGAATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGT 103 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| |||| ||| | ||||| || || |||||||| || ||| ||| |||| Sbjct 104 TTTGCCGCCATTTTCTGGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAAC 163 Query 94915 GAGCTTATCTCTCGTGACGAGG 94936 ||| | |||||||| || |||| Sbjct 164 GAGTTGATCTCTCGAGATGAGG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574378663942520