Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1030155 156 1e-32 seq985049 118 3e-21 seq1101710 95.1 4e-14 >seq1030155 Length=683 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | ||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct 476 ACCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 535 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||||| || |||||||||||||| || || ||||| || | || || || || || Sbjct 536 GAGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGG 595 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||||||| || || ||||| || ||||| ||||| ||||| | || || | ||||| Sbjct 596 AATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAAC 655 Query 140690 TTCAAGTGTAACTGTCTTTCC 140710 |||||| || | |||||||| Sbjct 656 TTCAAGAGTGATGGTCTTTCC 676 >seq985049 Length=630 Score = 118 bits (130), Expect = 3e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | || || || || || ||||| || || || || || Sbjct 346 CCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGAC 405 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || |||||||| | || || ||||| ||||| | ||| || || || || || Sbjct 406 AAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGG 465 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || ||||| || || || || || || ||||| || || | ||| || | ||| ||| Sbjct 466 ATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACT 525 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || |||| || || || || || ||||| || |||||||||||| Sbjct 526 TCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATT 573 >seq1101710 Length=836 Score = 95.1 bits (104), Expect = 4e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||||| || | | ||||| || || || |||||||| | | ||| || |||||| Sbjct 444 AGAACAAGGTGTAACATTGACTCCTTCTGTATGTTATAATCTAAAAGTGTACGGCCATCT 385 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 |||||||| || |||||||| || | | || |||||||| |||||||||||||| || Sbjct 384 TCAAGTTGCTTACCAGCAAAAATAAATCTCTGTTGATCAGGTGGAATTCCTTCTTTCTCT 325 Query 140646 TG 140647 || Sbjct 324 TG 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1491602607978219