Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1055522 158 1e-33 seq1002630 105 7e-18 seq1170154 86.0 7e-12 >seq1055522 Length=411 Score = 158 bits (174), Expect = 1e-33 Identities = 211/292 (72%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 79321 GGCAGGCCCGGG-CACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTT 79379 |||| | ||||| || |||||||| |||||||| ||| ||| || |||||| || Sbjct 18 GGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCG 77 Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439 ||||||||| ||||| || ||||| ||||| ||| | ||| | | || | ||||| Sbjct 78 CTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTC 137 Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499 | |||| ||| || ||||| || || | || ||| |||||||| || ||||| Sbjct 138 CTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAG 197 Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559 |||||| ||||||| || ||||||| |||||| |||| |||||| || || ||||| Sbjct 198 ATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTT 257 Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCG 79611 |||| | || || | ||| || || || |||| || | |||||| || ||| Sbjct 258 GTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCG 309 Score = 152 bits (168), Expect = 6e-32 Identities = 210/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 19394 GGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCC 19453 || || ||||| || || ||||||| || || ||| | ||||||| ||||||||| || Sbjct 308 GGCACCAACGGCATATCCAACGGTATAGTTCCTATGTTGCGCGTCTACAACAACACAGCA 249 Query 19454 AGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCA 19513 | |||||| |||| || ||| ||| ||| ||| ||||||| ||||| || || || Sbjct 248 CGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGCGCGTTCGCAATCTATCTGGAACCC 189 Query 19514 TGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATG 19573 ||||||||||||||| | || |||||||| || ||| ||| | ||||| | Sbjct 188 TGGCACGCGGACGTCTTCGAATTCCTCGATCTCAAGAAAAACACGGGCAAGGAGGAAGTT 129 Query 19574 CGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 || | ||| | ||| ||| | |||||||| ||||| ||||||||| || ||| Sbjct 128 CGAGCCAGGGACTTGTTCTACGCCCTCTGGATTCCCGACCTGTTCATGGAGCGCGTCGAG 69 Query 19634 AAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGAC 19687 ||| || || ||| |||||||| |||||||| || || || || ||||| Sbjct 68 AAGAACCTGGATTGGAGTCTGATGTGTCCGCACGATTGTCCCGGTCTTGCCGAC 15 >seq1002630 Length=654 Score = 105 bits (116), Expect = 7e-18 Identities = 396/612 (65%), Gaps = 33/612 (5%) Strand=Plus/Plus Query 78525 CCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTG 78584 |||||| ||||||||||| |||||||| ||||| | ||||| || || | |||||| Sbjct 2 CCGGCGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTG 61 Query 78585 GGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTT 78644 ||||| || || || |||||||| |||| || || ||||| |||| || ||| Sbjct 62 AGCGGTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGC 121 Query 78645 GATCTCGACCTTTAGGCCGTCCCAA---AATTCATTCGCCGCGATCCC---CCACATGTC 78698 ||||| |||| || | ||||| | ||| | | | | | ||||||||| Sbjct 122 GATCTTAGCCTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTC 181 Query 78699 CGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTC 78758 || || || |||| | |||| | || | | |||| ||| | || || | Sbjct 182 GTACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTT 241 Query 78759 CTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTT 78818 || |||||||||||| | | || || ||| || | | || ||||| Sbjct 242 CTCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGAC 301 Query 78819 GTTGAGCT--CGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCG 78876 |||||| | | || ||| | ||| ||||||| | | | || ||||||| ||| Sbjct 302 GTTGAGTTTCTGAGCTTCTTCG-CTC-TCGAACGGATAACGCATCAGGATGAAGAGATCC 359 Query 78877 GCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT---GCTCTTTCGGGCC 78933 || || ||||||| ||||||| |||| ||||| || |||||||| | |||| | Sbjct 360 GCGAGACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTT------C 413 Query 78934 GCCTCGG---TCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACC 78990 ||||||| ||||||| ||||| ||||||| || ||||| ||||||| | Sbjct 414 GCCTCGGGAATCGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTTTTCGTGACGGTC 473 Query 78991 CGAGTCACCTCGTACAATTTGGCGAAATCAAA---ATGATTTCCTTTGATGAAAGTCGGT 79047 || ||||| | | || ||||||| || | || ||||||| | | || Sbjct 474 TTCGTGACCTCCTTGAGCTTCTCGAAATCGAACGTCTTGTTCGGTTTGATGTACAT--GT 531 Query 79048 AGGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGAT 79103 | || ||||| || |||||||| |||||| ||| ||||| || | ||||| Sbjct 532 TG--ACGGCGATCGAGGCGAGGTTGCAAACGGCCACCTCTTCCGGCGAAGTGAACTCGAC 589 Query 79104 GATTTCTGTGCA 79115 || || ||||| Sbjct 590 AATCTCCGTGCA 601 Score = 91.5 bits (100), Expect = 2e-13 Identities = 311/470 (66%), Gaps = 26/470 (6%) Strand=Plus/Minus Query 20017 CGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA---CCGAGGCGGC 20073 ||||||| || || ||| ||||||| ||||| ||||||| |||||||| Sbjct 470 CGTCACGAAAAACCTTAATAAAATCATCGACGTCAACTTCTACCCGATTCCCGAGGCGAA 411 Query 20074 GCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGT 20133 | | ||||| ||||| || || || |||| |||||| ||||||| || || || | Sbjct 410 GACC---TCGAACATGCGTCATCGACCCATCGGTATCGGCATCCAGGGTCTCGCGGATCT 354 Query 20134 TTTCATGATGCT-CGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGCTCAACAAGGGC 20191 ||||| || | || || | ||||| || | | | || | | |||||| Sbjct 353 CTTCATCCTGATGCGTTATC-CGTTCGA-GAGCGAAGAAGCTCAGAAACTCAACGTCCAG 296 Query 20192 ATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAACTCGCCAAAGAG 20248 ||||| || | | || ||| || || ||||| || |||||||||||| | | Sbjct 295 ATCTTTGAAACAATCTATTACG--GCGCTT-TGGAAGCGAGCTGCGAACTCGCCGAGAAA 239 Query 20249 GACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCG--AGGGTATCCTCCAGCCGG 20306 || ||||| ||| |||| | | || | | ||| ||| | |||| || || ||| | Sbjct 238 GAAGGCCCATACTCTACGTACGAAGGAT-GTCCG-GTCAGCAAGGGGATTCTACAGTACG 181 Query 20307 ACATGTGGGGCGTCACTGAGAATGAGTTTTGGA-----GC-GCCCTCAAGGTTGAGATCA 20360 |||||||| ||| || | | | ||| || || ||||||| | ||||| Sbjct 180 ACATGTGGAACGTAACCCCCACCAATCTCTGGGATTGGGCAGCACTCAAGGCTAAGATCG 121 Query 20361 AGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCC 20420 ||||| |||| || || | ||| |||| |||||||| || || || ||||| | Sbjct 120 CACAGCACGGCGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTC 61 Query 20421 AGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 ||||| | || || ||||| | ||||| |||||||| ||||||||||| Sbjct 60 AGATCCTCGGCAATAACGAATCCTTCGAACCGTACACTTCCAACATCTAC 11 >seq1170154 Length=949 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/186 (72%), Gaps = 7/186 (4%) Strand=Plus/Plus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG---GAGCATCATTTGCACAACGTCTC 59987 || || || ||||| | |||||||| ||| | | ||||| |||| | | || Sbjct 2 AAGGCCGACTGGGCTCTTCAGTGGATCTGTCACGAGAGTGCATCCTTTGGCGAGAGAATC 61 Query 59988 ATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCTATTTTCT 60045 || || ||||| ||| || || || ||||||||||| || | ||| || || ||||||| Sbjct 62 ATTGCATTTGC-TGCAGTCGAGGGTATCTTCTTCTCCGG-TAGTTTTGCCGCCATTTTCT 119 Query 60046 GGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGG 60105 || | || || ||||| |||||||| ||||| | ||| ||||||| |||| || || | Sbjct 120 GGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAGTTGATCTCTCGAG 179 Query 60106 ACGAGG 60111 | |||| Sbjct 180 ATGAGG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540171638079120