Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1055522 158 1e-33
seq1002630 105 7e-18
seq1170154 86.0 7e-12
>seq1055522
Length=411
Score = 158 bits (174), Expect = 1e-33
Identities = 211/292 (72%), Gaps = 1/292 (0%)
Strand=Plus/Plus
Query 79321 GGCAGGCCCGGG-CACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTT 79379
|||| | ||||| || |||||||| |||||||| ||| ||| || |||||| ||
Sbjct 18 GGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCG 77
Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439
||||||||| ||||| || ||||| ||||| ||| | ||| | | || | |||||
Sbjct 78 CTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTC 137
Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499
| |||| ||| || ||||| || || | || ||| |||||||| || |||||
Sbjct 138 CTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAG 197
Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559
|||||| ||||||| || ||||||| |||||| |||| |||||| || || |||||
Sbjct 198 ATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTT 257
Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCG 79611
|||| | || || | ||| || || || |||| || | |||||| || |||
Sbjct 258 GTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCG 309
Score = 152 bits (168), Expect = 6e-32
Identities = 210/294 (71%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 19394 GGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCC 19453
|| || ||||| || || ||||||| || || ||| | ||||||| ||||||||| ||
Sbjct 308 GGCACCAACGGCATATCCAACGGTATAGTTCCTATGTTGCGCGTCTACAACAACACAGCA 249
Query 19454 AGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCA 19513
| |||||| |||| || ||| ||| ||| ||| ||||||| ||||| || || ||
Sbjct 248 CGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGCGCGTTCGCAATCTATCTGGAACCC 189
Query 19514 TGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATG 19573
||||||||||||||| | || |||||||| || ||| ||| | ||||| |
Sbjct 188 TGGCACGCGGACGTCTTCGAATTCCTCGATCTCAAGAAAAACACGGGCAAGGAGGAAGTT 129
Query 19574 CGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633
|| | ||| | ||| ||| | |||||||| ||||| ||||||||| || |||
Sbjct 128 CGAGCCAGGGACTTGTTCTACGCCCTCTGGATTCCCGACCTGTTCATGGAGCGCGTCGAG 69
Query 19634 AAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGAC 19687
||| || || ||| |||||||| |||||||| || || || || |||||
Sbjct 68 AAGAACCTGGATTGGAGTCTGATGTGTCCGCACGATTGTCCCGGTCTTGCCGAC 15
>seq1002630
Length=654
Score = 105 bits (116), Expect = 7e-18
Identities = 396/612 (65%), Gaps = 33/612 (5%)
Strand=Plus/Plus
Query 78525 CCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTG 78584
|||||| ||||||||||| |||||||| ||||| | ||||| || || | ||||||
Sbjct 2 CCGGCGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTG 61
Query 78585 GGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTT 78644
||||| || || || |||||||| |||| || || ||||| |||| || |||
Sbjct 62 AGCGGTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGC 121
Query 78645 GATCTCGACCTTTAGGCCGTCCCAA---AATTCATTCGCCGCGATCCC---CCACATGTC 78698
||||| |||| || | ||||| | ||| | | | | | |||||||||
Sbjct 122 GATCTTAGCCTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTC 181
Query 78699 CGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTC 78758
|| || || |||| | |||| | || | | |||| ||| | || || |
Sbjct 182 GTACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTT 241
Query 78759 CTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTT 78818
|| |||||||||||| | | || || ||| || | | || |||||
Sbjct 242 CTCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGAC 301
Query 78819 GTTGAGCT--CGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCG 78876
|||||| | | || ||| | ||| ||||||| | | | || ||||||| |||
Sbjct 302 GTTGAGTTTCTGAGCTTCTTCG-CTC-TCGAACGGATAACGCATCAGGATGAAGAGATCC 359
Query 78877 GCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT---GCTCTTTCGGGCC 78933
|| || ||||||| ||||||| |||| ||||| || |||||||| | |||| |
Sbjct 360 GCGAGACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTT------C 413
Query 78934 GCCTCGG---TCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACC 78990
||||||| ||||||| ||||| ||||||| || ||||| ||||||| |
Sbjct 414 GCCTCGGGAATCGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTTTTCGTGACGGTC 473
Query 78991 CGAGTCACCTCGTACAATTTGGCGAAATCAAA---ATGATTTCCTTTGATGAAAGTCGGT 79047
|| ||||| | | || ||||||| || | || ||||||| | | ||
Sbjct 474 TTCGTGACCTCCTTGAGCTTCTCGAAATCGAACGTCTTGTTCGGTTTGATGTACAT--GT 531
Query 79048 AGGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGAT 79103
| || ||||| || |||||||| |||||| ||| ||||| || | |||||
Sbjct 532 TG--ACGGCGATCGAGGCGAGGTTGCAAACGGCCACCTCTTCCGGCGAAGTGAACTCGAC 589
Query 79104 GATTTCTGTGCA 79115
|| || |||||
Sbjct 590 AATCTCCGTGCA 601
Score = 91.5 bits (100), Expect = 2e-13
Identities = 311/470 (66%), Gaps = 26/470 (6%)
Strand=Plus/Minus
Query 20017 CGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA---CCGAGGCGGC 20073
||||||| || || ||| ||||||| ||||| ||||||| ||||||||
Sbjct 470 CGTCACGAAAAACCTTAATAAAATCATCGACGTCAACTTCTACCCGATTCCCGAGGCGAA 411
Query 20074 GCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGT 20133
| | ||||| ||||| || || || |||| |||||| ||||||| || || || |
Sbjct 410 GACC---TCGAACATGCGTCATCGACCCATCGGTATCGGCATCCAGGGTCTCGCGGATCT 354
Query 20134 TTTCATGATGCT-CGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGCTCAACAAGGGC 20191
||||| || | || || | ||||| || | | | || | | ||||||
Sbjct 353 CTTCATCCTGATGCGTTATC-CGTTCGA-GAGCGAAGAAGCTCAGAAACTCAACGTCCAG 296
Query 20192 ATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAACTCGCCAAAGAG 20248
||||| || | | || ||| || || ||||| || |||||||||||| | |
Sbjct 295 ATCTTTGAAACAATCTATTACG--GCGCTT-TGGAAGCGAGCTGCGAACTCGCCGAGAAA 239
Query 20249 GACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCG--AGGGTATCCTCCAGCCGG 20306
|| ||||| ||| |||| | | || | | ||| ||| | |||| || || ||| |
Sbjct 238 GAAGGCCCATACTCTACGTACGAAGGAT-GTCCG-GTCAGCAAGGGGATTCTACAGTACG 181
Query 20307 ACATGTGGGGCGTCACTGAGAATGAGTTTTGGA-----GC-GCCCTCAAGGTTGAGATCA 20360
|||||||| ||| || | | | ||| || || ||||||| | |||||
Sbjct 180 ACATGTGGAACGTAACCCCCACCAATCTCTGGGATTGGGCAGCACTCAAGGCTAAGATCG 121
Query 20361 AGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCC 20420
||||| |||| || || | ||| |||| |||||||| || || || ||||| |
Sbjct 120 CACAGCACGGCGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTC 61
Query 20421 AGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTAC 20470
||||| | || || ||||| | ||||| |||||||| |||||||||||
Sbjct 60 AGATCCTCGGCAATAACGAATCCTTCGAACCGTACACTTCCAACATCTAC 11
>seq1170154
Length=949
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/186 (72%), Gaps = 7/186 (4%)
Strand=Plus/Plus
Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG---GAGCATCATTTGCACAACGTCTC 59987
|| || || ||||| | |||||||| ||| | | ||||| |||| | | ||
Sbjct 2 AAGGCCGACTGGGCTCTTCAGTGGATCTGTCACGAGAGTGCATCCTTTGGCGAGAGAATC 61
Query 59988 ATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCTATTTTCT 60045
|| || ||||| ||| || || || ||||||||||| || | ||| || || |||||||
Sbjct 62 ATTGCATTTGC-TGCAGTCGAGGGTATCTTCTTCTCCGG-TAGTTTTGCCGCCATTTTCT 119
Query 60046 GGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGG 60105
|| | || || ||||| |||||||| ||||| | ||| ||||||| |||| || || |
Sbjct 120 GGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAGTTGATCTCTCGAG 179
Query 60106 ACGAGG 60111
| ||||
Sbjct 180 ATGAGG 185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540171638079120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |