Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq771642 122 9e-23 seq1179405 120 3e-22 seq277695 89.7 6e-13 seq1002630 84.2 2e-11 >seq771642 Length=458 Score = 122 bits (134), Expect = 9e-23 Identities = 209/300 (70%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||||||||| |||| ||| || || |||||||| || | ||||||||| || ||||| Sbjct 366 CGTGAAGATGTAACGGGGGCTCGCGGCGTCCTTGCCGCCCGTCAGCCGCGTGCCGAACTG 307 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || ||||| | || |||| ||||||| ||| || || ||||| |||| | Sbjct 306 CCCGATGGGCTGCAACAGATTGATGTTGTTGCTGCCGACAAAGTTCTGCGCCAGCCCGAT 247 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || ||| | || ||| || |||||||| ||||| | ||| || ||| | || Sbjct 246 GATGGTGGTCATGAGCGACGCCTCGCCGTGGTGGTACGCAGACTGTTCGCCGACCGACCC 187 Query 152208 CGCCAACTGCGCCACCTT--CATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 |||| ||| || ||||| | | || | ||| | ||| | || || || | | | || Sbjct 186 GGCCAGCTGGGCGACCTTGACCTCTCGCTTGTC-GTTTCGT-TTCAGGCACGTGAAGATG 129 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 |||||||||||| || |||| |||||||||| || ||||| |||| | ||||| Sbjct 128 ACCTTGCGCTGGCCGGGCTTCAGGCCGTCCACCATCGACGGTATCGACCGCTCGTTGTCC 69 Score = 120 bits (132), Expect = 3e-22 Identities = 208/299 (70%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| || || |||||||| || | || ||||| ||||| || Sbjct 365 GTGAAGATGTAACGGGGGCTCGCGGCGTCCTTGCCGCCCGTCAGCCGCGTGCCGAACTGC 306 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | |||| ||| || || | ||||||| ||| |||||||| || |||| || Sbjct 305 CCGATGGGCTGCAACAGATTGATGTTGTTGCTGCCGACAAAGTTCTGCGCCAGCCCGATG 246 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || || ||| |||||| || ||||| ||||| | ||| || | || | || Sbjct 245 ATGGTGGTCATGAGCGACGCCTCGCCGTGGTGGTACGCAGACTGTTCGCCGACCGACCCG 186 Query 117485 GCCAGCTGAGCCACCTTCATGTCTGAC--GTCAGGTTCTTCTTGAGGCAGGCATAAATCA 117542 |||||||| || ||||| | ||| | ||| | ||| | || ||||| | | || | Sbjct 185 GCCAGCTGGGCGACCTTGACCTCTCGCTTGTC-GTTTCGT-TTCAGGCACGTGAAGATGA 128 Query 117543 CCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 |||||||||| | |||||||| || ||| ||| || ||||| |||| | ||||| Sbjct 127 CCTTGCGCTGGCCGGGCTTCAGGCCGTCCACCATCGACGGTATCGACCGCTCGTTGTCC 69 >seq1179405 Length=949 Score = 120 bits (132), Expect = 3e-22 Identities = 266/396 (67%), Gaps = 15/396 (4%) Strand=Plus/Minus Query 152736 CTCGATCAGCTTCGGCCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGA 152795 || || |||| |||||||| |||||| | |||| | ||| |||||||||||||| Sbjct 904 CTTGAGCAGCGACGGCCAGTTTGCGTGGATGAAATTGATCAGCAACCCCTTGATGTGCGA 845 Query 152796 TCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGCAG----GTCACGT- 152850 ||||| | ||| ||||||||||||||||| || ||||| ||||| ||| || Sbjct 844 ACCGTCCTGGTCCTGATCGGTCATGATCATCAGCCGGCCGTAACGCAGCGTCTTCAGGTC 785 Query 152851 ----AGTGACCCGTAGACCTTTC-CATGT--TGAAGCCCGAGGATCTTTTTGAGGTTGGA 152903 | | | |||| ||| | | ||| || || || | |||||| ||| |||| Sbjct 784 CTCCTGCGTCTCGTA---CTTGCGCTTGTACTGCAGTCCCATGATCTTGATGATGTTGTT 728 Query 152904 AAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCTTTCC 152963 | || | || ||| | ||| || || || |||| || ||| || ||| || Sbjct 727 TATCTCGACGTTCTCGAGTATCTGCTTGGAGGTCGCCTCCCTGACGTTGAGCACCTTGCC 668 Query 152964 CCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACGCTCAGACCGGCAATAGCAAG 153023 || | || ||||||||| || || ||||| | || | ||| |||| | || || Sbjct 667 TCGCAACGGGAACACGCCGTACTTGTCCCGGCCAATCACTCCCAGCCCGGACACGGCCAG 608 Query 153024 GGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGAGACCGATGAGTACC 153083 | || |||||||| ||||| || | || |||||||||||| | ||| | || || Sbjct 607 CGACTTGGCCGAGTCGCCCTCCGTCAGGATCAGCGTACAGTCGAGCGACTTGTTGGTGCC 548 Query 153084 GGCCCAGTTGGCGTCGTCAAGCTTGGGGATTCCCGT 153119 ||| ||||||||| || ||||| || | ||||| Sbjct 547 GGCGTCGTTGGCGTCCTCCAGCTTCGGCACGCCCGT 512 >seq277695 Length=258 Score = 89.7 bits (98), Expect = 6e-13 Identities = 168/241 (70%), Gaps = 7/241 (3%) Strand=Plus/Plus Query 55689 ACGGGGGGTCCGTCCAGAATCTGGAG---ATTCCTCTGCG-TCTCAAGGAGATTTACCGG 55744 ||||||| ||||||||| || | || ||||| | || |||||||| | ||| | Sbjct 15 ACGGGGGTTCCGTCCAGGATATCGACGGTATTCC-CGACGATCTCAAGGCTCTCTACAAG 73 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || ||||||||||| | ||||||| | || | ||| || || | || |||| | Sbjct 74 ACCGTGTGGGAGATCTCCCAGAAGACCATCATCAAGATGGCCGCCGACAGGGGAGCGTTC 133 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT-GGCCAAGTTGAG 55863 ||||||||| ||| || || |||||| ||| | || || ||| | || ||| Sbjct 134 ATCGACCAGAGCCAATCGCTCAACATCCACATCGCCAAACC-AAACTACGGGAAACTGAC 192 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||||||||||||| || |||| || ||| | |||||||| ||||| || || || || Sbjct 193 TTCGATGCACTTTTTCGCGTGGCAGTCCGGATTGAAGACGGGGATGTATTACCTCCGTAC 252 Query 55924 C 55924 | Sbjct 253 C 253 >seq1002630 Length=654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | || || ||||| ||| | || || ||||| || || || || ||||||||| | Sbjct 112 GGCGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTCAGATCCTC 53 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGG 55588 ||||| ||||| | ||||| |||||||| ||||||||||| |||||| Sbjct 52 GGCAATAACGAATCCTTCGAACCGTACACTTCCAACATCTACACCCGCCGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538882769025400