Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq771642 136 4e-27 seq985049 132 5e-26 seq261774 102 9e-17 >seq771642 Length=458 Score = 136 bits (150), Expect = 4e-27 Identities = 209/292 (72%), Gaps = 6/292 (2%) Strand=Plus/Plus Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020 ||||||| || || ||| ||||||||| ||||| ||||||||||| || | | Sbjct 77 AGCGGTCGATACCGTCGATGGTGGACGGCCTGAAGCCCGGCCAGCGCAAGGTCATCTTCA 136 Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATG--AAGGTGGCGCAGCTGTCGGGCTACGT 32078 | ||||| || | ||| | | | || || | | ||||| || |||||| | || | || Sbjct 137 CGTGCCTGAA-ACGAAAC-GACAAGCGAGAGGTCAAGGTCGCCCAGCTGGCCGGGTCGGT 194 Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138 | || || | || || ||||||||||||||||||||| | |||||| || || Sbjct 195 CGGCGAACAGTCTGCGTACCACCACGGCGAGGCGTCGCTCATGACCACCATCATCGGGCT 254 Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAG-CCATCTGGACAGTTTG 32197 || |||||||||||||| || ||| | || | | || ||||| || ||||| | Sbjct 255 GGCGCAGAACTTTGTCGGCAGCAACAACATCAATCTGTTGCAGCCCATC-GGGCAGTTCG 313 Query 32198 GGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249 | || ||||| | || |||||||| || |||||| |||||||||||||||| Sbjct 314 GCACGCGGCTGACGGGCGGCAAGGACGCCGCGAGCCCCCGTTACATCTTCAC 365 >seq985049 Length=630 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||| || || || || || || || || || || ||||| || || || || | Sbjct 576 TAAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGC 517 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 |||| || | ||| | ||||| || || || ||||| ||||| || || ||||| Sbjct 516 TTCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGA 457 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||| |||||| | || || ||||||||||| | || |||| |||||| | | ||||| Sbjct 456 CCAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTA 397 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||||||||||| || || || | ||| |||||||||| ||||| Sbjct 396 CAACATCCAAAAGGAATCAACACTCCACTTGGTCCTGCGTCTTCGTGGTGG 346 >seq261774 Length=254 Score = 102 bits (112), Expect = 9e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 80982 AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTA 81041 ||| || || || || | |||||| ||||| | |||||||||||| ||||| |||||| Sbjct 23 AATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAAGCGTCTTTGTACAGCATGTA 82 Query 81042 CGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC 81101 || || ||||| |||||||| || | || |||||||| ||| | || | || ||||| Sbjct 83 TGGCGTTCCGGTTTCGACCTGGGATTCGATGATGGCGTACCACAGCTGTTGGGCTTTGAC 142 Query 81102 CACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA 81140 | ||| ||| || ||||| | | | ||||||| ||| Sbjct 143 CTTCTTCACGAACTTTCCTTCCGACTCGTACTTGGTGTA 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561625477975760