Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq771642 136 4e-27
seq985049 132 5e-26
seq261774 102 9e-17
>seq771642
Length=458
Score = 136 bits (150), Expect = 4e-27
Identities = 209/292 (72%), Gaps = 6/292 (2%)
Strand=Plus/Plus
Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020
||||||| || || ||| ||||||||| ||||| ||||||||||| || | |
Sbjct 77 AGCGGTCGATACCGTCGATGGTGGACGGCCTGAAGCCCGGCCAGCGCAAGGTCATCTTCA 136
Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATG--AAGGTGGCGCAGCTGTCGGGCTACGT 32078
| ||||| || | ||| | | | || || | | ||||| || |||||| | || | ||
Sbjct 137 CGTGCCTGAA-ACGAAAC-GACAAGCGAGAGGTCAAGGTCGCCCAGCTGGCCGGGTCGGT 194
Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138
| || || | || || ||||||||||||||||||||| | |||||| || ||
Sbjct 195 CGGCGAACAGTCTGCGTACCACCACGGCGAGGCGTCGCTCATGACCACCATCATCGGGCT 254
Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAG-CCATCTGGACAGTTTG 32197
|| |||||||||||||| || ||| | || | | || ||||| || ||||| |
Sbjct 255 GGCGCAGAACTTTGTCGGCAGCAACAACATCAATCTGTTGCAGCCCATC-GGGCAGTTCG 313
Query 32198 GGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249
| || ||||| | || |||||||| || |||||| ||||||||||||||||
Sbjct 314 GCACGCGGCTGACGGGCGGCAAGGACGCCGCGAGCCCCCGTTACATCTTCAC 365
>seq985049
Length=630
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461
|| |||||| || || || || || || || || || || ||||| || || || || |
Sbjct 576 TAAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGC 517
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|||| || | ||| | ||||| || || || ||||| ||||| || || |||||
Sbjct 516 TTCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGA 457
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||| |||||| | || || ||||||||||| | || |||| |||||| | | |||||
Sbjct 456 CCAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTA 397
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||||||||||| || || || | ||| |||||||||| |||||
Sbjct 396 CAACATCCAAAAGGAATCAACACTCCACTTGGTCCTGCGTCTTCGTGGTGG 346
>seq261774
Length=254
Score = 102 bits (112), Expect = 9e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 80982 AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTA 81041
||| || || || || | |||||| ||||| | |||||||||||| ||||| ||||||
Sbjct 23 AATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAAGCGTCTTTGTACAGCATGTA 82
Query 81042 CGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC 81101
|| || ||||| |||||||| || | || |||||||| ||| | || | || |||||
Sbjct 83 TGGCGTTCCGGTTTCGACCTGGGATTCGATGATGGCGTACCACAGCTGTTGGGCTTTGAC 142
Query 81102 CACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA 81140
| ||| ||| || ||||| | | | ||||||| |||
Sbjct 143 CTTCTTCACGAACTTTCCTTCCGACTCGTACTTGGTGTA 181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561625477975760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |