Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq406137 185 2e-42 seq170843 131 4e-26 >seq406137 Length=297 Score = 185 bits (204), Expect = 2e-42 Identities = 199/261 (76%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 39377 CTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGAT-TTTCC 39435 ||||||||||||||||||| ||||||| | |||||| ||| | | | | || |||| Sbjct 259 CTGAAGTGGTCAACAAAAATTGGCCACGGCTTTAGAGCTTTCCCAA--AACAATCTTTCT 202 Query 39436 GATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCA 39495 ||||| || |||| ||| ||||| ||||||| ||| ||||| || ||||||||| ||| Sbjct 201 GATTCATTGGGTGTTAATCCACCGTTATATTGGTGGGGTCTGAGCTGGCTGTAATAGCCA 142 Query 39496 ACGATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGC 39555 | |||||| | ||||| || | ||| ||||| || | || ||||| | ||| Sbjct 141 ATGATATAATTAGTTATCGCTTTGTTTGCTTCGCTAAAATTAACGTAGCCACTTTTCGGT 82 Query 39556 ACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTT 39615 |||||||| |||||| || | ||| ||||| ||||| |||||||||||||| || ||| Sbjct 81 ACCCATTCTGACTTCAGGCTGCGGAAAAAGCGTTCCATCGGGCTGTTATCCCAACAATTT 22 Query 39616 CCACGCCGACTCATACTCTGC 39636 || ||||||||||| || ||| Sbjct 21 CCTCGCCGACTCATGCTTTGC 1 Score = 183 bits (202), Expect = 8e-42 Identities = 198/260 (76%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 16753 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGAT-TTTCCG 16811 |||||||||||||||||| ||||||| | |||||| ||| | | | | || |||| | Sbjct 258 TGAAGTGGTCAACAAAAATTGGCCACGGCTTTAGAGCTTTCCCAA--AACAATCTTTCTG 201 Query 16812 ATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAA 16871 |||| || |||| ||| ||||| ||||||| ||| ||||| || ||||||||| |||| Sbjct 200 ATTCATTGGGTGTTAATCCACCGTTATATTGGTGGGGTCTGAGCTGGCTGTAATAGCCAA 141 Query 16872 CGATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGCA 16931 |||||| | ||||| || | ||| ||||| || | || ||||| | ||| | Sbjct 140 TGATATAATTAGTTATCGCTTTGTTTGCTTCGCTAAAATTAACGTAGCCACTTTTCGGTA 81 Query 16932 CCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTTC 16991 ||||||| |||||| || | ||| ||||| ||||| |||||||||||||| || |||| Sbjct 80 CCCATTCTGACTTCAGGCTGCGGAAAAAGCGTTCCATCGGGCTGTTATCCCAACAATTTC 21 Query 16992 CACGCCGACTCATACTCTGC 17011 | ||||||||||| || ||| Sbjct 20 CTCGCCGACTCATGCTTTGC 1 >seq170843 Length=231 Score = 131 bits (144), Expect = 4e-26 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 17164 CATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCA 17223 ||| |||||||| | ||| || | | |||| || || || || || || || ||||| Sbjct 1 CATTGCCCAGCCTATTGGCTTGCGAGAAAACAAATCCAGTACCACCGCCAGATAAGCCCA 60 Query 17224 GCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCAC 17283 ||| || |||||||||| ||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct 61 GCGTTTGCCCGTCCAGAGATACGTCACATCACCGCACCAGACCTGATTAGGCTCCGTCAC 120 Query 17284 GGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTC 17325 |||||||| || || || | || |||||| | ||||| || Sbjct 121 CGCGAACTGACGATCCAGATGATTCGGGATATCCACATGCTC 162 Score = 131 bits (144), Expect = 4e-26 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 39789 CATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCA 39848 ||| |||||||| | ||| || | | |||| || || || || || || || ||||| Sbjct 1 CATTGCCCAGCCTATTGGCTTGCGAGAAAACAAATCCAGTACCACCGCCAGATAAGCCCA 60 Query 39849 GCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCAC 39908 ||| || |||||||||| ||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct 61 GCGTTTGCCCGTCCAGAGATACGTCACATCACCGCACCAGACCTGATTAGGCTCCGTCAC 120 Query 39909 GGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTC 39950 |||||||| || || || | || |||||| | ||||| || Sbjct 121 CGCGAACTGACGATCCAGATGATTCGGGATATCCACATGCTC 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130248042353800