Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028766.1 Length=33755 Score E Sequences producing significant alignments: (Bits) Value seq590707 80.6 6e-11 >seq590707 Length=369 Score = 80.6 bits (88), Expect = 6e-11 Identities = 162/238 (68%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 28481 CAGCATTTTGGTTTCACTTCCGTGCCACCTGCCGGCACGCAAGCGGTTGTTATCCCCTTA 28540 ||||| || || || || || || ||||| |||||| | | | |||| | || | Sbjct 338 CAGCAATTCGGATTAACATCTAACCCGCCTGCAGGCACGAATGTGATTGTATTGCCTCTG 279 Query 28541 GGTGGTAAAACCACGCACGGTATTATTGTGGCGACTGAAAACGGCTCGTTTAGGGTTAAA 28600 || || || |||| ||| | ||| | || || |||||||| ||| | || || Sbjct 278 AACGGCAATACTTCGCATGGTGTGATTATTGCAACGGAAAACGGTAGCTTTCGTGTGCAA 219 Query 28601 AATCTAAAAAATGGTGAGACGGCTATTTATGATTCAAGC-GGCTCAACTATCATATTAAA 28659 || ||| |||||| || || |||||| ||| | |||||||| |||| |||||| Sbjct 218 TCACTGAAATCTGGTGAAACTTGCATATATGAT-CAATCAGGCTCAACAATCACATTAAA 160 Query 28660 AAACGGGCGAGTGATTGATATTGAGTGCGATAGCTTTAACATTAAATGCAAGCAATAT 28717 |||| | | || |||||||| |||||| |||| ||||||||||| ||||| Sbjct 159 AAACAACAAAATAATAGATATTGAATGCGATGAACTTAATATTAAATGCAAAAAATAT 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106333492591842