Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq555338 84.2 7e-12 >seq555338 Length=352 Score = 84.2 bits (92), Expect = 7e-12 Identities = 184/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 40042 GTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCCC 40101 ||||||||| || || |||| || ||| ||||||| ||| ||| ||||| | Sbjct 270 GTCCAGCACACGCCCCACGTCGCGTATGGCGGCGCGCGCCGCCATCGTGCCAAAGGTGAC 211 Query 40102 GATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCG 40161 ||| || |||| ||| ||||| || | ||||||| ||| || |||| Sbjct 210 GATTTGGCTGACCGCATCGAGACCGTATTTGTGTTTGACGTAGTCGATCACGCGATCGCG 151 Query 40162 AC-GCCG-GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGG 40219 | ||| | || |||||||| || | |||||||||||| || ||||| || |||| Sbjct 150 ATTGCCTTGGCAA--AAGTCGATATCGAAGTCGGGCATGGATACCCGCTCAGGATTCAAA 93 Query 40220 AACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAG 40279 || |||||||| | || || | ||| ||||||||||| || || ||| ||| Sbjct 92 AATCGCTCGAACAGCAGGTTGTATTGCAGCGGATCGAGGTCAGTAATTTTGAGCGCGTAA 33 Query 40280 GCGACCAGCGAACCGGCTGCCGAGCCTCGCCC 40311 || |||||||| || || |||| || || || Sbjct 32 GCCACCAGCGAGCCTGCACCCGAACCGCGTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158085801914502