Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq985049 120 2e-22 seq1030155 113 3e-20 >seq985049 Length=630 Score = 120 bits (132), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||||||||||||||||||| |||||||||||||| ||||| || || || ||||| || Sbjct 577 TTAAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAG 518 Query 23666 CCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 | | || ||| | || ||| | || | || || |||||||| || | || ||| Sbjct 517 CTTCCGATACTATCGAGAATGTCAAGGC-GAAGATCCAAGACAAAGAGGGCATCCCACCA 459 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 || ||||||||||| || || || || || || ||||||| | || || || ||| Sbjct 458 GACCAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGAC 399 Query 23785 TACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 |||||||| ||||| || || ||| | || || || Sbjct 398 TACAACATCCAAAAGGAATCAACACTCCACTTGGT 364 >seq1030155 Length=683 Score = 113 bits (124), Expect = 3e-20 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 23638 GGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAA 23696 ||||| || |||||||| |||||||| || ||||||| |||| ||| | ||| | || Sbjct 676 GGAAAGACCATCACTCTTGAAGTTGAGGCCTCGGACACCATTGAGAATGTGAAAGCCAAG 617 Query 23697 AATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACA 23756 | || ||||| ||||| | || ||||| |||||| | | || || ||||||||||| Sbjct 616 A-TTCAAGACAAGGAAGGAATTCCCCCAGACCAACAGAGGCTGATCTTCGCCGGCAAACA 558 Query 23757 ACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTT 23816 ||| ||||||| || ||| | |||||||||||| || || ||||| || | || || Sbjct 557 ACTTGAAGACGGTCGAACTCTCTCCGATTACAACATTCAGAAGGAGTCTACCCTTCACTT 498 Query 23817 AGTT 23820 ||| Sbjct 497 GGTT 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 332990934122684