Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq985049 156 1e-32 seq1030155 127 5e-24 seq1215361 93.3 1e-13 >seq985049 Length=630 Score = 156 bits (172), Expect = 1e-32 Identities = 170/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||| | |||||| || ||||| ||||||| ||||| |||| ||| || Sbjct 351 ACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 410 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| ||||||||||| | || |||||||| || || || || Sbjct 411 ACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCC 470 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || |||||||||||||| ||| ||| ||||| || || || | ||| || |||| Sbjct 471 CTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAG 530 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 || || || || ||||| | ||||| | ||| | ||||||||| Sbjct 531 GGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTA 576 >seq1030155 Length=683 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||| || || | ||| || || || || || || | |||||||||| | ||| Sbjct 482 ACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGT 541 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || ||||| || || || || |||||||| || | |||||||| || ||||| || Sbjct 542 TCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCC 601 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| |||||| || |||||||| |||| || || || | Sbjct 602 TTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAACTTCAAG 661 Query 225672 CGTGATCGTCTTGCC 225686 ||||| ||||| || Sbjct 662 AGTGATGGTCTTTCC 676 >seq1215361 Length=2594 Score = 93.3 bits (102), Expect = 1e-13 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| || || ||||| ||| ||||||||||||| ||||||||||| | | | Sbjct 234 GGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGTCCC 175 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA-ATATTTACGCG 7855 ||||| || |||||||||| | |||||||| |||| | | |||| ||| | || | ||| Sbjct 174 CGTCAATTCCTTTGAGTTTCAGCCTTGCGGCCGTACTCCCCAGGCGGACAACTTAATGCG 115 Query 7856 TTAGCT 7861 |||||| Sbjct 114 TTAGCT 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1173916834041462