Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1211838 104 2e-17 >seq1211838 Length=1880 Score = 104 bits (114), Expect = 2e-17 Identities = 208/307 (68%), Gaps = 1/307 (0%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| | || || ||||| | || || ||||| || ||||| | ||| || ||||||| Sbjct 403 CTTGA-TGTACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAA 345 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| || ||||| || || | || || |||| || ||||| | | || | ||| | Sbjct 344 TCTGGAAACCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCA 285 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | | || ||||| || || ||||| || ||||| || ||||| || || || || | Sbjct 284 CGAGATTCTCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGA 225 Query 4993 AGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTT 5052 | | | || || || || | |||||| | || || || | || || || | Sbjct 224 AATGCCTCTCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCT 165 Query 5053 CTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACT 5112 |||| | ||||| || || ||||| || || |||||||| ||| || ||| | |||| Sbjct 164 CTTCTGCTGTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACT 105 Query 5113 GAATCGG 5119 | || || Sbjct 104 GGATAGG 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420708894719909