Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1211838 104 2e-17
>seq1211838
Length=1880
Score = 104 bits (114), Expect = 2e-17
Identities = 208/307 (68%), Gaps = 1/307 (0%)
Strand=Plus/Minus
Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872
||||| | || || ||||| | || || ||||| || ||||| | ||| || |||||||
Sbjct 403 CTTGA-TGTACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAA 345
Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932
|||| || ||||| || || | || || |||| || ||||| | | || | ||| |
Sbjct 344 TCTGGAAACCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCA 285
Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992
| | || ||||| || || ||||| || ||||| || ||||| || || || || |
Sbjct 284 CGAGATTCTCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGA 225
Query 4993 AGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTT 5052
| | | || || || || | |||||| | || || || | || || || |
Sbjct 224 AATGCCTCTCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCT 165
Query 5053 CTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACT 5112
|||| | ||||| || || ||||| || || |||||||| ||| || ||| | ||||
Sbjct 164 CTTCTGCTGTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACT 105
Query 5113 GAATCGG 5119
| || ||
Sbjct 104 GGATAGG 98
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420708894719909
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |