Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1197690 172 8e-38 seq1002630 123 3e-23 >seq1197690 Length=1171 Score = 172 bits (190), Expect = 8e-38 Identities = 438/662 (66%), Gaps = 6/662 (1%) Strand=Plus/Plus Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 78386 |||||||| || || ||||| ||||| || |||| | || || |||||||| | Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351 Query 78387 TGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCA 78446 ||| | ||| | ||| | || | ||||| || ||||| || || || || Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411 Query 78447 GAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCT 78506 || | |||| ||| || |||||||| || || ||||| | || || ||||| || Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471 Query 78507 ACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTAT 78566 |||||||||| ||| ||||| || | ||| || || | || || | |||||| Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGACTTTCTGATCAATGCGAAGCAAGTAC 531 Query 78567 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAA 78624 || |||| |||||||| ||||| || ||||| ||||| |||| ||||| || | Sbjct 532 GAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATTA 589 Query 78625 TAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAA 78684 || | ||||| ||| ||| | || | || | | | | | | ||| || | Sbjct 590 TAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGCTGGTGAAAATCTGAGATCA 649 Query 78685 TAGGAG-ATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCA 78743 | || | | | | | ||| | | | |||| ||| ||||||||||| |||||| Sbjct 650 TTGGGGTAGCCCTCTTCGTTTCTTTGTTATACATC-TTATGCAAATCTTCCATAACATCA 708 Query 78744 CTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATA 78803 || || ||| ||||| |||||||| | || || || || || | |||||| || ||| Sbjct 709 CTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGATA 768 Query 78804 GCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAAC 78863 ||||||||||| |||| || || ||||| || |||| || || ||| |||| | | Sbjct 769 GCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAAGC 828 Query 78864 TCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGA 78923 || | |||||| || ||| ||| || || | || || ||||| | ||| | || Sbjct 829 TCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCGGT 888 Query 78924 TCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGATGTGATTTTATCA 78983 || | ||| || |||| | ||||| || | |||| ||| ||||| || || || || Sbjct 889 TCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGTCG 948 Query 78984 AA 78985 || Sbjct 949 AA 950 >seq1002630 Length=654 Score = 123 bits (136), Expect = 3e-23 Identities = 303/457 (66%), Gaps = 2/457 (0%) Strand=Plus/Plus Query 77151 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 77210 || ||||| || || || || ||||| | ||||| || || || | || ||||| Sbjct 6 CGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCG 65 Query 77211 GTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGAT 77269 || ||||| || ||||| || || | | | ||| | | || || ||| | ||| Sbjct 66 GTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGC-GAT 124 Query 77270 TTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTA 77329 ||| | || || | ||||||||| |||| | || || | ||| | ||||| Sbjct 125 CTTAGCCTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTA 184 Query 77330 TTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTC 77389 |||||||| || || || | |||| | || || || || |||||| | || Sbjct 185 CTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTC 244 Query 77390 AGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATT 77449 || ||||| || ||||||||||| || |||||||| |||||||| || |||| || Sbjct 245 GGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTT 304 Query 77450 GAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAA 77509 ||| | || ||||| || || ||||||||| | | || || ||| ||| || | Sbjct 305 GAGTTTCTGAGCTTCTTCGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAG 364 Query 77510 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAAT 77569 ||||| | || ||||| || |||| ||| | | | || || | || || || ||||| Sbjct 365 ACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTTCGCCTCGGGAAT 424 Query 77570 AGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || | || | ||| || |||||||| || ||| Sbjct 425 CGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTT 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684090096962720