Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1197690 141 1e-28 >seq1197690 Length=1171 Score = 141 bits (156), Expect = 1e-28 Identities = 471/724 (65%), Gaps = 14/724 (2%) Strand=Plus/Plus Query 76894 TTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCAT 76953 ||| |||| |||||||| | | || || || || || ||||| || || || Sbjct 264 TTTGGAGACCAGAGCACACTGACGTAGAGTATCGTAAATCCCTTCTATGCTGTCGTCTGA 323 Query 76954 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGT 77013 |||| | || || |||||||| | ||| | ||| | ||| | || | || Sbjct 324 CATGGCCAATAGGAAGCAGCTAGATAACTGAGGTCTTGGAGTAGCAGCACTGAAGAGGGT 383 Query 77014 AGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTC 77073 || || ||||||||||| || || || | |||| ||| || |||||| | | || Sbjct 384 CGGGGAAGCATGAGTGAAGTATCGCTCCGACAAAAGATCGTAGGTCTCAATAGCGGAATC 443 Query 77074 TATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133 || || | || || ||||||||||||||||||| ||| ||||| || ||||| || Sbjct 444 AATGTCTTCTCCGTGGATGCCTACAGCGACACGCATCAGCATGTGCTGCGGACGTTCGAC 503 Query 77134 AGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 77193 || | || || | |||||| || |||| |||||||| ||||| || || Sbjct 504 GACTTTCTGATCAATGCGAAGCAAGTACGAACGCTCCAGCGTTTTAAATCCAAAGTAATT 563 Query 77194 GTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTA 77251 ||| ||||| |||| ||||| || ||| | ||||| ||| || || || | | Sbjct 564 GTAGCTGAAA--TCTCGATCGTAGATTATAGCGGAATTAAGTCGATCAGCATTCTTTGAA 621 Query 77252 ACAATATCC--ATGACAGTGGTAGAAATAATTGGAG--ATCGTATTCCATTTTTAGGATT 77307 | | | | ||| | | || || ||||| | | | ||| || || | || Sbjct 622 ATTACTTGCTGGTGAAAAT--CTGAGATCATTGGGGTAGCCCTCTTCGTTTCTTTG--TT 677 Query 77308 A-ACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTA 77366 | |||| ||| || |||||||| || || || || ||| ||||| |||||||| | Sbjct 678 ATACAT-CTTATGCAAATCTTCCATAACATCACTGAAAGATTTCTTTGTCTCCTTGTGCA 736 Query 77367 GATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGG 77426 || || || || || | ||||| || || ||||| ||||| |||| || || | Sbjct 737 AGTTTGAGACTGCAATACGTGCAGCAAGGATAGCATAATCAGGGTGTTTAGTGGTCATTG 796 Query 77427 TGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCC 77486 |||| || |||| || || ||| |||| | || | ||| ||||| || ||| || | Sbjct 797 TGGCGGCCGTTTCGGCTGCCAAATTATCAAGCTCGACAGTTGTAACGCCAGGATAGAGAC 856 Query 77487 CTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAAC 77546 | | || || ||||| | |||| || || | ||| || |||| | |||||| | Sbjct 857 CGTTGATTACCTTCATCGTTATTGCAGCCGGTTCCAGAAAATCCATGTTGAGACCATAGC 916 Query 77547 ATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCATTTC 77606 | | |||| ||| ||||| || || || || || ||| | || |||| ||||| | Sbjct 917 AAAGTTTTTGAATTCGAGAGGTTATCTTGTCGAAATGGACCTCTTCTTTACGTCCATCGC 976 Query 77607 GTTT 77610 |||| Sbjct 977 GTTT 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702077540871360