Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq985049 170 4e-37 seq1030155 123 5e-23 seq1033248 113 9e-20 seq1119540 100 6e-16 seq25371 84.2 5e-11 >seq985049 Length=630 Score = 170 bits (188), Expect = 4e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || || || |||| || | || ||| ||||||||||||||||| | | Sbjct 346 CCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGAC 405 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || | || || || || ||||||||||| |||||||| || Sbjct 406 AAG-GTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGG 464 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||| |||||||||||||| || || || | |||||||| || |||||||| || Sbjct 465 GATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTAC 524 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || || || || |||||||| | || || ||||| ||||||||||| Sbjct 525 TTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTT 575 >seq1030155 Length=683 Score = 123 bits (136), Expect = 5e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | || || || || |||||||| || | Sbjct 476 ACCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 535 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || || || |||||||| ||||| ||||||| | |||||||| || Sbjct 536 GAGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGG 595 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| ||||| || | || || |||||||| || || || Sbjct 596 AATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAAC 655 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 ||| |||||||| ||||| || Sbjct 656 TTCAAGAGTGATGGTCTTTCC 676 >seq1033248 Length=572 Score = 113 bits (124), Expect = 9e-20 Identities = 223/322 (69%), Gaps = 10/322 (3%) Strand=Plus/Minus Query 43984 CAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACT 44043 |||||||| || || || ||||||||||||| || || || || ||||||| ||| Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACTACT 295 Query 44044 CCGTTTTATCCCCGGAGTCCATATG-GTGTGGCGAAGCTATATGCCTATTGGAT--TTGT 44100 || ||||| || ||| || || | ||||| | ||||| || || |||||||| | || Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGTGCC-AAGCTCTACGCGTATTGGATAGTCGT 236 Query 44101 AAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAA 44160 || || || ||| | || | ||||||| ||||| || |||||||||||| Sbjct 235 TAAC--TACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGAA 178 Query 44161 AGTCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATT 44220 ||||| | |||||| | ||||||||||| || |||||| | || ||||| || Sbjct 177 AGTCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATC 118 Query 44221 TTCAACGGGACAGAAAAAT--GCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGG 44278 || ||| | | || | || | || || || | || || |||||||| |||| Sbjct 117 GTCCTAGGG-CTTATTGATTATCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGG 60 Query 44279 GATATGCCTTGGATTATGTAGA 44300 | ||||| |||||||||||| Sbjct 59 GTCATGCCAGGGATTATGTAGA 38 >seq1119540 Length=600 Score = 100 bits (110), Expect = 6e-16 Identities = 219/321 (68%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 43984 CAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACT 44043 |||||||| || || || ||||||||||||| || || || || ||||||| || Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACTACC 295 Query 44044 CCGTTTTATCCCCGGAGTCCATATG-GTGTGGCGAAGCTATATGCCTATTGGAT--TTGT 44100 || ||||| || ||| || || | ||||| | ||||| || || || ||||| | || Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGTGCC-AAGCTCTACGCGTACTGGATAGTCGT 236 Query 44101 AAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAA 44160 || || || ||| | || | ||||||| ||||| || ||||| |||||| Sbjct 235 TAAC--TACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGAA 178 Query 44161 AGTCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATAT- 44219 ||||| | ||||| | ||||||||||| || |||||| | || ||||| || Sbjct 177 AGTCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATC 118 Query 44220 TTTCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGG 44279 ||| | || | | | | || | || || || | || || |||||||| ||||| Sbjct 117 GTTCTAGGGCTTATTGATTTTCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGG 59 Query 44280 ATATGCCTTGGATTATGTAGA 44300 ||||| |||||||||||| Sbjct 58 TCATGCCAGGGATTATGTAGA 38 >seq25371 Length=204 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || || | || || || || || || || || || Sbjct 204 CCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTATCGGACGCCTCCACCTCT 145 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| ||||||| ||| || || || |||||||| Sbjct 144 AGTGTGATGGTCTTGCCCGTCAGAGTTTTCACAAAGATCTGCAT 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1030400519274542