Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq985049 156 1e-32 seq1030155 127 5e-24 >seq985049 Length=630 Score = 156 bits (172), Expect = 1e-32 Identities = 168/218 (77%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 |||||||||| | |||||||||||||| ||||| || ||||| || ||||| || || Sbjct 578 GTTAAAATGC---AGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTA 522 Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 ||| || || || |||||||| ||||| ||||| || |||||||| || ||||| Sbjct 521 GAAGCTTCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCA 462 Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-C 178090 || ||||| || || | |||||||| || || ||| | |||||||| | || |||| | Sbjct 461 CCAGACCAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTAC-CTTGTC 403 Query 178091 CGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||| || ||| ||||||| ||||||||||| || |||| Sbjct 402 CGACTACAACATCCAAAAGGAATCAACACTCCA-CTTG 366 >seq1030155 Length=683 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 177944 CACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACA 178003 || |||||| || ||||| || || || || ||| |||||||| ||||| || ||| Sbjct 680 CATAGGAAAGACCATCACTCTTGAAGTTGAGGCCTCGGACACCATTGAGAATGTGAAAGC 621 Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 |||||||| ||||| |||||||| || || ||||| || | || ||||||||||| || Sbjct 620 CAAGATTCAAGACAAGGAAGGAATTCCCCCAGACCAACAGAGGCTGATCTTCGCCGGCAA 561 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 ||| || ||||| || | ||||| ||||||| ||| | || || || || || || || Sbjct 560 ACAACTTGAAGACGGTCGAACTCTCTCCGATTACAACATTCAGAAGGAGTCTACCCTTCA 501 Query 178124 TCTTGTTTTGAGACT 178138 | ||| | ||||| Sbjct 500 CTTGGTTCTCAGACT 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184942011865962