Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq985049 96.9 3e-15 seq1030155 95.1 1e-14 >seq985049 Length=630 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | |||| || || || ||||| || ||||| ||||||| Sbjct 344 CGCCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGG 403 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | | ||| || | || || | |||||| || ||||| |||| ||||||||||| | | Sbjct 404 ACAAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTG 463 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | || ||| ||||| ||| || ||| | | | ||| ||| | || | Sbjct 464 GGATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTA 523 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 | || | || || ||||||||||| || || || |||||||||||||| ||| Sbjct 524 CTTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTA 576 >seq1030155 Length=683 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/114 (79%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| || |||||||| || || |||| || || || ||||||||||| Sbjct 512 CTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAA 571 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 ||||| | ||||||||| | ||||| | ||||||| | ||| | || |||| Sbjct 572 GATCAGCCTCTGTTGGTCTGGGGGAATTCCTTCCTTGT-CTTGAATCTTGGCTT 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455263843987600