Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq132376 89.7 4e-13 >seq132376 Length=11941 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 11/226 (5%) Strand=Plus/Minus Query 97057 TGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCA 97116 ||||| |||||| |||||||| ||||||||||||||||||||||| |||| | | Sbjct 1013 TGATTACTATAAATATGAGCATCACCTAAAGTGTGAATAAATTCTCC--TAACTGA--TA 958 Query 97117 GTGACA----TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCAC 97172 | ||| || || | ||| ||||||| | ||| |||||| |||||||| || Sbjct 957 GCCACATATTTGTGCTAACATTATTGTTAATAATGCATAAGAAGCAATATTAAAAGGAAC 898 Query 97173 CCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTT---CCATCACA 97229 |||| ||||| || | ||||||||| ||||| || | ||| ||||| | Sbjct 897 TCCTAAAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGA 838 Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTT 97275 || ||||| ||| | || |||||| || || | ||||| ||| Sbjct 837 AACGTAAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTT 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345919627442120