Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1065 95.1 3e-14 >seq1065 Length=2691 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || || ||||| |||| |||||| || || | || || ||||||||| |||| ||| Sbjct 17 TTTGCGATGTACCTGGAGCCGTGGCATGCGGACGTGTTTGACTTCCTGGACCTGAAGAAG 76 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 || | ||||| ||| | | ||||| ||||||||||||||||| ||| || | ||| Sbjct 77 AATACAGGCAAGGAGGAGAATCGGGCGCGGGACCTCTTCTACGGCCTCTGGATCCCGGAC 136 Query 249397 TTGTTCATGCGCCGCGT 249413 ||||||||||| || || Sbjct 137 TTGTTCATGCGGCGGGT 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070952744133888