Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq112114 100 2e-16 >seq112114 Length=2115 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||| ||||| ||||||||||| ||| ||| |||| || Sbjct 1960 ACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCG 1901 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| || | ||||| || || || || | || ||||||||| Sbjct 1900 AGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCTTCCTTGTCCTGG 1841 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | |||| | ||| ||||| | || ||||||||| Sbjct 1840 ATTTTGGCCTTGACGTTTTCGATGGTGTCGCTCGGCTCAACCTCGAGCGTGATCGTCTTG 1781 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || ||||| |||||| Sbjct 1780 CCAGTGAGGGTCTTGACGAAGATCTGCATG 1751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| || ||| | || || Sbjct 1732 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCG 1673 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| || || |||||||| || | |||||||||||| | Sbjct 1672 AGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGA 1613 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||||||||| | || || || || Sbjct 1612 ATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCACCTCGAGCGTGATGGTTTTC 1553 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || || || ||||| |||||| Sbjct 1552 CCGGTCAGGGTTTTGACGAAGATCTGCATG 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394090459754836