Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq112114 104 2e-17 >seq112114 Length=2115 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||| || | ||| | || ||||| || || ||||| || ||| Sbjct 1751 GCCTCCGCGCAGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1692 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||||||||||| || || || |||||||||||||||| ||||| || Sbjct 1691 CAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 1632 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || || || ||||| ||| | || | || | | ||| | |||||| | ||||||| Sbjct 1631 GATCCCCTCCTTGTC-CTGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCA 1573 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | || || ||||||| ||||| ||||| || ||||| Sbjct 1572 CCTCGAGCGTGATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 139629 CATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTT 139687 || |||||||||| |||||||||||||| || ||||| ||||| ||| |||| | || Sbjct 2115 CAAAGATCAGACGCTGCTGATCGGGAGGAATACCTTCCTTGTC-CTGAATTTTCGCCTTC 2057 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | || | ||||||||||| | ||| Sbjct 2056 ACGTTCTCGATCGTGTCACTGGGCTCCACCTCCAGTGTGATTGTCTTGCCGGTGAGGGTT 1997 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 1996 TTGACGAAGATCTGCAT 1980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494795837187200