Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq112114 100 7e-16 >seq112114 Length=2115 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| || || ||||| || | || | Sbjct 1741 AGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGG 1682 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || || || || || || || || | || || || || || || || || Sbjct 1681 CCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCC 1622 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||||||||| || || || ||||| | || ||||| || || ||||| || || Sbjct 1621 TTGTCCTGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCACCTCGAGCGTG 1562 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| || || |||||||| Sbjct 1561 ATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148381320249328