Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq181426 89.7 3e-13 seq192204 84.2 1e-11 >seq181426 Length=2852 Score = 89.7 bits (98), Expect = 3e-13 Identities = 72/87 (83%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||||| |||||| | | ||||||||||| ||||||||||||||||||||||| Sbjct 92 AAAAAATC---TTGGCCTGCGCAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGAC 36 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||| ||||||||| ||||| Sbjct 35 GCTCTAACCGACTGAGCTAGCAGGCCG 9 >seq192204 Length=2666 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| Sbjct 798 GGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTA 744 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260839423051216