Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1065 127 5e-24 >seq1065 Length=2691 Score = 127 bits (140), Expect = 5e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| |||||| |||| |||||||| ||||| || || || || ||| Sbjct 924 GCGCAGCAGCTGTGGTACGCCATCCTGGAGTCGCAGATAGAGACGGGCACCCCGTACATG 983 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| ||| | |||||| |||||||||||||| || |||| || || || || Sbjct 984 CTGTACAAGGATGCCTGCAACAGCAAGTCCAACCAGAAGAACCTCGGCACCATCAAGTGC 1043 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||||||| || |||||| | | || ||||| || || |||||| Sbjct 1044 AGCAACCTGTGCACCGAGGTCGTCGAGTACACTGCGCCGGACGAG 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299938342731512