Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq31268 152 3e-32 >seq31268 Length=3617 Score = 152 bits (168), Expect = 3e-32 Identities = 262/377 (69%), Gaps = 14/377 (4%) Strand=Plus/Plus Query 6235 AGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA 6294 |||| ||||| ||||| ||||| || || || || | ||||||||| || || || | Sbjct 2914 AGGTGGAGGGCAAGGGCAACGGCATCAAGACGGTGCTGGTCAACATGGGGGAGGTGGCCA 2973 Query 6295 AGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTC 6354 |||| || || || |||||||||||||| || || || || ||||| || || || | Sbjct 2974 AGGCCCTGAACCGGCCGGCCACCTACCCGACCAAGTACTTTGGTTGCGAGCTGGGGGCCC 3033 Query 6355 AGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCA 6414 |||||||| | || ||| ||||| |||| |||||| ||||| | || | | |||| Sbjct 3034 AGACGCAGCTGGACGCCAAGAACGACCGCTACATCGTCAACGGGGCTCACGAGGCGGCCA 3093 Query 6415 AGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTG----TCGGGAATGC 6470 ||||||||||| | || |||||||| || ||| | |||||||| ||| ||| Sbjct 3094 AGCTGCAGGACATCCTGGACGGCTTCATCCGCCGCTACGTGCTGTGCGCCTCG----TGC 3149 Query 6471 GATAACCCGGAGACCGAGCTTATTGTG-TCTA--CCAAGAGAAACACCATCTCTCAGGGC 6527 || ||||| ||||| | ||| ||| || | |||| | || || | | || Sbjct 3150 GACAACCCCGAGACGGTGCTCGGGGTGCTCCAGCGCAAGGGGCTCATCACCACCAAG--- 3206 Query 6528 TGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCACACAAACTCAACACCTTCATA 6587 ||| |||||||| || |||| || || | ||||| |||||||||||||| Sbjct 3207 TGCCGGGCGTGCGGCCACAGCGGCACCCTCGACGGGGCCCACAAGCTCAACACCTTCATC 3266 Query 6588 CTGAAGAATCCTCCACC 6604 || ||||| || || || Sbjct 3267 CTCAAGAACCCGCCGCC 3283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334112331124796