Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq112114 87.8 2e-12 >seq112114 Length=2115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || || || || || || ||||| || || Sbjct 1948 GTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 1889 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 1888 GCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCTTCCTTGTCCTGGATTTTGGCCTTG 1829 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | ||||||| | | || || || | || | ||| ||||| || || || Sbjct 1828 ACGTTTTCGATGGTGTCGCTCGGCTCAACCTCGAGCGTGATCGTCTTGCCAGTGAGGGTC 1769 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 1768 TTGACGAAGATCTGCATGCCT 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419087198727792