Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1065 100 3e-16 >seq1065 Length=2691 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94454 AGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCA 94513 |||||||| | ||| |||| ||| | |||||||| || || ||||| ||| || Sbjct 931 AGCTGTGGTACGCCATCCTGGAGTCGCAGATAGAGACGGGCACCCCGTACATGCTGTACA 990 Query 94514 AGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATC 94573 |||| | |||| ||||||||||||| || ||||||| |||||| || || | Sbjct 991 AGGATGCCTGCAACAGCAAGTCCAACCAGAAGAACCTCGGCACCATCAAGTGCAGCAACC 1050 Query 94574 TGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 ||||||||||| | |||||||| ||| | ||||||||| Sbjct 1051 TGTGCACCGAGGTCGTCGAGTACACTGCGCCGGACGAG 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493458464875360