Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq112114 131 2e-25 >seq112114 Length=2115 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| || | || | | | ||||| || || ||||||||||| Sbjct 1979 GCCACCGCGCAGACGCAGGACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGA 1920 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||||||| || |||| |||| |||||||| || ||||| || Sbjct 1919 CAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1860 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| || | | ||| | ||||||| ||| ||| || Sbjct 1859 AATCCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCGATGGTGTCGCTCGGCTCAAC 1800 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| ||| | ||| || ||||| || || || || || ||||||||| || Sbjct 1799 CTCGAGCGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 1748 Score = 111 bits (122), Expect = 2e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||| || | || | | | |||||||| || |||||||||||| Sbjct 1751 GCCTCCGCGCAGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1692 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || ||||| || || |||| |||| ||||| || ||||| || || Sbjct 1691 CAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 1632 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | | ||| | |||||| ||| ||||| Sbjct 1631 GATCCCCTCCTTGTCC-TGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCA 1573 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||||| ||| | ||||| || ||||| ||||| || || ||||||||| || Sbjct 1572 CCTCGAGCGTGATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCATGACT 1520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494993729987520