Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq56668 132 2e-25 >seq56668 Length=3325 Score = 132 bits (146), Expect = 2e-25 Identities = 206/293 (70%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| ||||||||||| ||||| || || ||| |||||| |||| |||||| ||||| Sbjct 2997 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 3056 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| |||||| || ||||| || |||||||||| ||||| || || ||||| | Sbjct 3057 GGAATTATTGCGGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATT 3116 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| || || || ||| | | |||| | || |||||||||||||| || Sbjct 3117 GCTTATGGTTTA-GATAAACAAGATA-----AAGATCACAAAATTTTAGTATTTGACTTA 3170 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 ||||| || || ||| ||| || || | | | | ||| |||||||||| Sbjct 3171 GGTGGTGGGACATTTGACGTTTCAGTTCTAGAATTAGCGGGTGGAACATTTGAAGTATTA 3230 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 |||| | |||||||| | || || ||||| || ||||| | |||||| Sbjct 3231 TCAACTAGTGGTGATAACAAACTTGGTGGTGATGACTTTGATGACTTAATTGT 3283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1970541304063728