Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq56668 105 5e-17 >seq56668 Length=3325 Score = 105 bits (116), Expect = 5e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 ||||||||| | | |||||| |||||||||||||| ||| | || || | |||||| Sbjct 3125 ACCATAAGCAATGGCAGCAGCAGTTGGTTCGTTAATAATTCTTTCTACTTTTAATCCCGC 3066 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 || || ||||| | ||| |||| ||||||| ||| ||||| || ||||||||||| Sbjct 3065 AATAATTCCTGCATTTTTAGTAGCTTCACGTTGTTCATTGTTAAAGTAAGCAGGAACAGT 3006 Query 361825 AATCACTGCTTTT 361837 ||| ||||||||| Sbjct 3005 AATAACTGCTTTT 2993 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || ||||| || || || ||||| | ||||||| ||||||||||| |||| Sbjct 2997 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 3056 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| |||||| ||| | || || | ||||| || ||||| ||||||||||| || Sbjct 3057 GGAATTATTGCGGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATT 3116 Query 550520 GCATATGGACTTGATAAAC---ATAATGATCA 550548 || ||||| | ||||||| |||| ||||| Sbjct 3117 GCTTATGGTTTAGATAAACAAGATAAAGATCA 3148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4018480271552840