Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_016652.1 Length=49330 Score E Sequences producing significant alignments: (Bits) Value seq119336 93.3 1e-14 >seq119336 Length=2555 Score = 93.3 bits (102), Expect = 1e-14 Identities = 209/306 (68%), Gaps = 11/306 (4%) Strand=Plus/Plus Query 15912 GGTCGTCGGTGACTTCTTCGGCTGGGTCTGGAACACGCTCATCAAGCCGGTGTGGGACAA 15971 |||| ||| |||||||||||||||| ||||||||| |||||| || || ||| || Sbjct 1523 GGTC-TCGCTGACTTCTTCGGCTGGATCTGGAACAACATCATCAGCCCTGTCTGGAACGC 1581 Query 15972 GCTCGGCGACGGCATCAAGTGGGTCTGGGAGAACGTCATTCAGAAGGCGTTCGACGGCAT 16031 | | ||||||||||| |||||| || ||| | ||| | || | ||| | Sbjct 1582 GTTGGGCGACGGCATTTCGTGGGTGGTCGACAACATTATTTTGCCCGCCTGGGACACGCT 1641 Query 16032 CAAGATTGGTCTCGGATACGTC--CGGACCGCGTTCGACGAGGCCGTGAAGTTCATCGAG 16089 | | |||| | || |||| | |||||| | || || |||||| Sbjct 1642 CGGCGGGGCGCTCGACACCCTCGGCGGATGG--TTCGACTCCACAGTCAACTTCATCAGC 1699 Query 16090 AAGGTGTGGGACGGAGTCCGCAAAGCA--GTCGCGGCGCCGATCAAGTTCGTCATCGATT 16147 | ||||| || | || || ||| ||||||| || ||||| ||||||||||| Sbjct 1700 GACATGTGGAACCGCATCA--AAGGCATCGTCGCGGTCCCCATCAACTTCGTCATCGACA 1757 Query 16148 CGGTGTACAACAACGGCATCCGCGAGGCCTGGAACAAGGTCGCTGGACTGG-TCGGTCTC 16206 | || |||||| |||||||||||| | |||||||||||||| |||||| | || ||| Sbjct 1758 CTGTCTACAACCACGGCATCCGCGCCGTGTGGAACAAGGTCGC-CGACTGGCTTGGCCTC 1816 Query 16207 GGCCAG 16212 |||||| Sbjct 1817 GGCCAG 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157351321898464