Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq167660 84.2 7e-12 >seq167660 Length=1700 Score = 84.2 bits (92), Expect = 7e-12 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 21371 CCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATG 21430 |||||||| ||||| ||||| |||||||| |||||||||||||||||||| || || | Sbjct 1700 CCGATGATCTCGGATCTGCGTGAGTCCGGTTCGATCGAGCAGGACGCCGATCTGGTCCTC 1641 Query 21431 TTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTAC-CG-CGGCGTGGCTGAGT 21488 || | |||| || || | ||| || ||| || | | || || ||||| ||| || Sbjct 1640 CTCATCCACCGTGAGGACATGTACGACAAGGA-ACAC-GAACGCGCCGGCGAGGCCGACA 1583 Query 21489 TGATCATCGCGAAGCACCG 21507 | ||| |||| |||||||| Sbjct 1582 TCATCGTCGCCAAGCACCG 1564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156728837362024