Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_018281.1 Length=43581 Score E Sequences producing significant alignments: (Bits) Value seq195504 95.1 3e-15 >seq195504 Length=12304 Score = 95.1 bits (104), Expect = 3e-15 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 36923 AGAAGTTGAAAAGATTTCTCGTGATTTAAAAATTATAGCTAAAGAAACAGGTTGTATCA- 36981 ||||||| ||| ||||||||| |||||||||| | || | |||| | | ||| || Sbjct 96 AGAAGTTTCAAATATTTCTCGTAGTTTAAAAATTTTGGCAAGAGAATTAAGA-GTACCAA 154 Query 36982 TTATCGCACTATCTCAATTAAGTAGAGGCGTAGAAAGTCGTAGTGATAAACGTCCGATGA 37041 || | |||| |||||| ||| || || || ||| || |||||||| | | Sbjct 155 TTGTTTGTTTATCACAATTATCAAGAATGGTGGAGAGACGTGAAGAAAAACGTCCTTTAA 214 Query 37042 TGTCTGATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTAT 37101 ||||||||||| | || |||| | ||||| ||||| || || | ||| | || |||| Sbjct 215 TGTCTGATTTACGTGAGTCAGGGGCTATTGAACAAGATGCTGATGTAATTATGTTTTTAT 274 Query 37102 ACCGTGATGATTATTA 37117 | |||||||||||||| Sbjct 275 ATCGTGATGATTATTA 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138999200872856