Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq132376 147 1e-30 >seq132376 Length=11941 Score = 147 bits (162), Expect = 1e-30 Identities = 196/267 (73%), Gaps = 4/267 (1%) Strand=Plus/Minus Query 78365 ATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTA-CTTCCAGTC 78423 |||||| | ||||||||||| ||||| | |||||||| || ||||||| || || | Sbjct 1014 ATGATTACTATAAATATGAGCATCACCTAAAGTGTGAATAAATTCTCCTAACTGATAG-C 956 Query 78424 CGCACAAATGCGC-AATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATT 78482 | || | || || || | ||| ||| | |||||| || |||||||| ||||| |||| | Sbjct 955 CACATATTTGTGCTAACATTAT-TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACT 897 Query 78483 CCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGAT 78542 ||||| || | || | || ||||| || ||||| ||| || ||| |||| | || Sbjct 896 CCTAAAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAA 837 Query 78543 ACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGGA 78602 |||||||| || | || ||| ||||| || ||||||||||||| | | || |||||| Sbjct 836 ACGTAAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGA 777 Query 78603 TTCCAAGCAGACACAATATGTCTGCGT 78629 || || || || | ||| ||||| ||| Sbjct 776 TTTCATGCTGATAAAATGTGTCTTCGT 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299411839568800