Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq132376 91.5 2e-13 >seq132376 Length=11941 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 148998 AACATTTGTAGAGCCAGACATAAACCATAATAATTCA-GAA--ATACAAGCTTTCCATGC 149054 || ||| ||| |||| ||||| |||||||| ||| ||| ||| |||| ||| Sbjct 510 AATATTAGTATCACCAGCAATAAATCATAATAACTCATGAACAATAGAAGCAAA--ATGA 453 Query 149055 TAGTTTTTTAGTAGTAATTGCTGGAAAACCTTTTTGTAAATCAAACCTTAATTGTGTGCC 149114 | |||||| ||||| | | ||||||||||||||||||||||| | | ||| || Sbjct 452 -ACTTTTTTTGTAGTTAATATGGGAAAACCTTTTTGTAAATCAAAACGCATTTGATAACC 394 Query 149115 AAATACTGCAATAGTACCAGTTCCAGTACGATCATCAGTTTGATAGCCGCTTTCAAAAAT 149174 ||| | || ||||||||| || || | |||| | ||| ||| || |||| |||| Sbjct 393 AAAAGTAGAAACAGTACCAGTGCCTGTTCTATCAGCTTTTTTATATCCTTTTTCTAAAAC 334 Query 149175 ATGTTTAATTAGATCTTGATATTGTTTCAT 149204 || || | || |||| |||||||||||| Sbjct 333 ATATTGACATAAATCTAAATATTGTTTCAT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538680161567840