Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq56668 98.7 6e-15 >seq56668 Length=3325 Score = 98.7 bits (108), Expect = 6e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 ||||| ||||||||||| || || ||||| || |||||| |||| |||||| |||| Sbjct 2997 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 3056 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 |||| ||||| || | || || | | |||||||| |||||||| || || || || Sbjct 3057 GGAATTATTGCGGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATT 3116 Query 474857 GCTTATGGTCTTGATAA 474873 ||||||||| | ||||| Sbjct 3117 GCTTATGGTTTAGATAA 3133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3259406516448368