Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_020158.1 Length=102319 Score E Sequences producing significant alignments: (Bits) Value seq35508 84.2 1e-11 >seq35508 Length=1175 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 35086 CATACACTCGTGCTCCGCGCGGACGAACACCACGACTGCCTGCGGTTCGAGTTCTTCGTG 35145 ||| ||| ||| || || ||||| || | | | ||||||| ||||| | |||| Sbjct 631 CATGCACAGGTGTTCGGCCTCGACGACGACGATGGCGCCCTGCGGGTCGAGGTGTTCGAC 690 Query 35146 GATGGCGTCTGCGATTTGGTTCGTCAGGCGCTCCTGCACCTGCGGGCGACGAGCGTATCC 35205 || ||||| ||||| || ||||| || ||||||||||| |||||||| || || Sbjct 691 GAGCGCGTCGGCGATCTGCGCGGTCAGCCGTTCCTGCACCTGGGGGCGACGGGCATAGAT 750 Query 35206 CCGCACGACTCGCGCCAGTTTCGACAGGCCCACGAC-------TTCCTCGTCCGGGATAT 35258 | |||| || |||||||||||||| ||| ||| ||||| | |||||| | Sbjct 751 CTCGACGAGGCGGGCCAGTTTCGACAGTCCCGTGACCTTGCCGTTCCT-GCTCGGGATGT 809 Query 35259 ACCCGACGTGAGCGCGTCCTCGGAACGGGAGGAAGTGGTG 35298 | |||| || ||| || |||| || | || |||||| Sbjct 810 AGCCGATATGGGCGACACCGTGGAAGGGCACGAGGTGGTG 849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 326480202037280